Gene omics information

Query gene ID At3g52060
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4761.2At3g52060824369unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POBS.X.H.G.
0.3338.1At3g52480824413unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.3338.1At4g33750---S.X.H.G.
0.2930.3At3g63210825496MARD1encodes a novel zinc-finger protein with a proline-rich N-terminus, identical to senescence-associated protein SAG102S.X.H.G.
0.2726.2At3g49790824141ATP bindingF:ATP binding;P:biological_process unknown;C:unknown;PS.X.H.G.
0.1710.2At1g75540843890STH2 (SALT TOLERANCE HOMOLOG2)F:transcription factor activity, zinc ion binding;P:unknown;C:intracellular;POMFS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
37.599.7GSM131177AtGen_D-9_1-DS_REP1_ATH1GSE5617AtGenExpress: Light treatments
36.499.7GSM131207AtGen_D-41_3-DS_REP3_ATH1GSE5617AtGenExpress: Light treatments
34.999.7GSM131184AtGen_D-16_1-WS_REP1_ATH1GSE5617AtGenExpress: Light treatments
34.799.7GSM131172AtGen_D-4_1-RL_REP1_ATH1GSE5617AtGenExpress: Light treatments
34.699.7GSM131187AtGen_D-20_2-RL_REP2_ATH1GSE5617AtGenExpress: Light treatments
33.699.7GSM131210AtGen_D-44_3-RS_REP3_ATH1GSE5617AtGenExpress: Light treatments
33.099.7GSM131178AtGen_D-10_1-FS_REP1_ATH1GSE5617AtGenExpress: Light treatments
32.799.7GSM131203AtGen_D-37_3-BL_REP3_ATH1GSE5617AtGenExpress: Light treatments
32.699.7GSM131202AtGen_D-36_3-RL_REP3_ATH1GSE5617AtGenExpress: Light treatments
32.599.7GSM131212AtGen_D-46_3-AS_REP3_ATH1GSE5617AtGenExpress: Light treatments
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.085e-136At5g22070832268unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POBC.G.S.X.
0.025e-136At3g57700824939protein kinase, putativeF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAC.G.S.X.
0.025e-136At3g57770824946protein kinase, putativeF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;PMOFBVAC.G.S.X.
0.025e-136At1g66810842999zinc finger (CCCH-type) family proteinF:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:unknown;MOPFC.G.S.X.
0.012e+034At5g55500835643XYLT (ARABIDOPSIS THALIANA BETA-1,2-XYLOSYLTRANSFERASE)Encodes a beta-1,2-xylosyltransferase that is glycosylated at two positions.C.G.S.X.
0.022e+034At5g62550836375unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;OMBFPVAC.G.S.X.
0.012e+034At5g55230835616ATMAP65-1 (MICROTUBULE-ASSOCIATED PROTEINS 65-1)Binds and bundles microtubules. Plays a role in stabilizing anti-parallel microtubules in the central spindle at anaphase to early cytokinesis but is not essential at the midline of the phragmoplast at later stages. The timing with which the MAP65-1 was targeted to the spindle appears to be regulated by a phosphorylation sensitive switch. Enhances microtubule polymerization, promotes nucleation and stabilizes microtubules against cold treatment and dilution.C.G.S.X.
0.012e+034At4g224855008156-Encodes a Protease inhibitor/seed storage/LTP family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.112e-138Glycine maxGma.7553.1.S1_atBI498776--7e-9At5g22070unknown proteinC.G.S.X.
0.021e+034Hordeum vulgareHI02J18u_atHI02J18u--3e+0At1g77910unknown proteinC.G.S.X.
0.024e-344Oryza sativaOs01g0622800AK063171.1-Conserved hypothetical protein2e-3At3g52060unknown proteinC.G.S.X.
0.042e-138Populus trichocarpaPtpAffx.18500.1.A1_atCV242326hypothetical protein-7e-1At5g22070unknown proteinC.G.S.X.
0.032e+034Triticum aestivumTa.19612.1.S1_atCD895161--3e-1At3g63095-C.G.S.X.
0.022e+032Vitis vinifera1618834_atCF204983.1--7e-2At3g28080nodulin MtN21 family proteinC.G.S.X.
0.032e-136Zea maysZm.7157.1.A1_atCK985795catalytic/ oxidoreductase, acting on NADH or NADPH-1e-3At1g10530unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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