Gene omics information

Query gene ID At3g51760
Gene name unknown protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g51760824339unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8089.8At1g78530844189protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.8089.8At2g38300818410DNA binding / transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;POMFS.X.H.G.
0.7586.9At2g46070819215MPK12 (MITOGEN-ACTIVATED PROTEIN KINASE 12)Encodes a MAP kinase protein. MPK12 interacts with the IBR5 protein phosphatase in vitro and in vivo, and it can be dephosphorylated and inactivated by IBR5. MPK12 appears to be a negative regulator of auxin signlaing. MPK12 RNAi lines are hypersensitive to auxin in root elongation and transcriptional response assays, but they appear to have normal sensitivity to ABA. MPK12 is a nuclear protein and its kinase activity is increased following auxin treatment. MPK12 transcripts are widely expressed in seedlings, but MPK12 expression is stronger in guard cells than in other cell types in mature plants.S.X.H.G.
0.6478.9At2g20875816621EPF1 (EPIDERMAL PATTERNING FACTOR 1)F:molecular_function unknown;P:stomatal complex patterning;C:unknown;PS.X.H.G.
0.6478.9At1g11340837676S-locus lectin protein kinase family proteinF:in 7 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVAS.X.H.G.
0.6176.7At3g55500824715ATEXPA16 (ARABIDOPSIS THALIANA EXPANSIN A16)expansin-like protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.S.X.H.G.
0.6075.7At2g40260818618myb family transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;PMOFS.X.H.G.
0.5974.7At4g17970827522unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;BPOFS.X.H.G.
0.5974.7At3g17070820964peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
696.5100.0GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
66.999.8GSM133766Lindsey_1-18_torpedo-root_Rep3_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
46.599.8GSM176876AWP_AL_Txed_1GSE7334Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
32.999.7GSM74904ice1_3H Cold_Rep1GSE3326ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
27.599.7GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
22.799.6GSM74908ice1_24H Cold_Rep1GSE3326ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.021e-138At5g24760832545alcohol dehydrogenase, putativeF:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:oxidation reduction, metabolic process;C:chloroplast;BOPFMAVC.G.S.X.
0.024e-136At5g15330831385SPX4 (SPX DOMAIN GENE 4)F:molecular_function unknown;P:cellular response to phosphate starvation;C:cellular_component unknown;FMPOC.G.S.X.
0.014e-136At3g28040822428leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.014e-136At1g25490839135RCN1 (ROOTS CURL IN NPA)One of three genes encoding phosphoprotein phosphatase 2A regulatory subunit A; Recessive ethylene-response mutant EER1 displays increased ethylene sensitivity in the hypocotyl and stemC.G.S.X.
0.022e+034At5g63260836446zinc finger (CCCH-type) family proteinF:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:unknown;PMFOC.G.S.X.
0.022e+034At5g18470831965curculin-like (mannose-binding) lectin family proteinF:sugar binding;P:biological_process unknown;C:plant-type cell wall;PC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e-136Glycine maxGma.12056.1.S1_atBG653523--1e-1At3g51760unknown proteinC.G.S.X.
0.037e-134Hordeum vulgareHVSMEk0014B12r2_atHVSMEk0014B12r2--8e-1At1g08310esterase/lipase/thioesterase family proteinC.G.S.X.
0.038e-136Oryza sativaOs04g03352009632.m02486--6e-1At3g10985SAG20 (SENESCENCE ASSOCIATED GENE 20)C.G.S.X.
0.032e+034Populus trichocarpaPtpAffx.215804.1.S1_atpmrna30204hypothetical protein-1e+0At5g09461CPuORF43 (Conserved peptide upstream open reading frame 43)C.G.S.X.
0.032e+034Triticum aestivumTaAffx.23936.1.S1_x_atCA727991--5e-1At3g50980XERO1 (DEHYDRIN XERO 1)C.G.S.X.
0.035e-134Vitis vinifera1619119_atCF511812hypothetical protein LOC100252541-9e-2At5g23060CaS (Calcium sensing receptor)C.G.S.X.
0.023e+032Zea maysZm.5984.1.A1_atAI666042--1e+0At5g53830VQ motif-containing proteinC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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