Gene omics information

Query gene ID At3g51610
Gene name unknown protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g51610824324unknown proteinF:molecular_function unknown;P:response to oxidative stress;C:endomembrane system;POS.X.H.G.
0.7385.5At5g10780830945-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPS.X.H.G.
0.6176.7At5g51510835225unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.5773.8At3g15660820809GRX4 (GLUTAREDOXIN 4)F:metal ion binding;P:cell redox homeostasis;C:mitochondrion;OBMPFAS.X.H.G.
0.2930.3At4g12590826872unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion, endoplasmic reticulum;MFOPS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
14.099.4GSM133307RIKEN-NAKABAYASHI3AGSE5700AtGenExpress: Effect of ABA during seed imbibition
10.999.2GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
9.399.1GSM133314RIKEN-LI2BGSE5701AtGenExpress: Basic hormone treatment of seeds
8.198.9GSM133309RIKEN-NAKABAYASHI4BGSE5700AtGenExpress: Effect of ABA during seed imbibition
8.098.9GSM133119RIKEN-YAMAUCHI2AGSE5687AtGenExpress: Different temperature treatment of seeds
8.098.9GSM133310RIKEN-NAKABAYASHI5BGSE5700AtGenExpress: Effect of ABA during seed imbibition
7.998.9GSM133318RIKEN-LI4BGSE5701AtGenExpress: Basic hormone treatment of seeds
7.598.8GSM133305RIKEN-NAKABAYASHI2AGSE5700AtGenExpress: Effect of ABA during seed imbibition
7.298.8GSM133308RIKEN-NAKABAYASHI4AGSE5700AtGenExpress: Effect of ABA during seed imbibition
6.998.7GSM265429Arabidopsis, root, longitudinal zone 2, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.023e-136At2g47360819349unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PC.G.S.X.
0.013e-136At1g17450838317-F:molecular_function unknown;P:unknown;C:unknown;POBC.G.S.X.
0.011e+034At5g04360830315ATLDA (LIMIT DEXTRINASE)Encodes an enzyme thought to be involved in the hydrolysis of the α-1,6 linkages during starch degradation in seed endosperm. However, a knockout mutant of Arabidopsis lacking limit dextrinase has normal rates of starch degradation in the leaf at night, indicating that more than one isoamylases might be involved in this process.C.G.S.X.
0.011e+034At3g45700823712proton-dependent oligopeptide transport (POT) family proteinF:transporter activity;P:oligopeptide transport;C:membrane;PMBOFC.G.S.X.
0.011e+034At2g32780817839UBP1 (UBIQUITIN-SPECIFIC PROTEASE 1)F:ubiquitin-specific protease activity, ubiquitin thiolesterase activity, zinc ion binding;P:ubiquitin-dependent protein catabolic process;C:cellular_component unknown;MOFPBVC.G.S.X.
0.031e+034At2g04790815022unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;POC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.118e-652Glycine maxGmaAffx.92865.1.S1_atCF806079--6e-6At3g51610unknown proteinC.G.S.X.
0.071e-859Hordeum vulgareContig7658_atContig7658--4e-8At3g51610unknown proteinC.G.S.X.
0.087e-136Oryza sativaOs05g0168400CR283498-Conserved hypothetical protein3e-1At3g11400eukaryotic translation initiation factor 3G / eIF3gC.G.S.X.
0.388e-961Populus trichocarpaPtp.3821.1.S1_s_atCV245704hypothetical protein-7e-9At3g51610unknown proteinC.G.S.X.
0.076e-652Triticum aestivumTaAffx.86629.1.S1_atAJ612548--1e-5At3g51610unknown proteinC.G.S.X.
0.252e-342Vitis vinifera1619129_atCF215433hypothetical protein LOC100249981-4e-3At3g51610unknown proteinC.G.S.X.
0.097e-1063Zea maysZm.14290.1.S1_atCD998001hypothetical protein LOC100278212-2e-9At3g51610unknown proteinC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0006979A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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