Gene omics information

Query gene ID At3g51450
Gene name strictosidine synthase family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4558.3At3g51450824308strictosidine synthase family proteinF:strictosidine synthase activity;P:alkaloid biosynthetic process, biosynthetic process;C:endomembrane system;BPMOAFS.X.H.G.
0.5065.3At1g44350841026ILL6encodes a protein similar to IAA amino acid conjugate hydrolase.S.X.H.G.
0.5065.3At1g70700843407TIFY7JAZ9 is a protein presumed to be involved in jasmonate signaling. JAZ9 transcript levels rise in response to a jasmonate stimulus. JAZ9 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. The Jas domain appears to be important for JAZ9-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2.S.X.H.G.
0.4355.3At5g47240834771atnudt8 (Arabidopsis thaliana Nudix hydrolase homolog 8)F:hydrolase activity;P:response to wounding;C:cytosol;BOMPAFVS.X.H.G.
0.4050.8At5g05600830443oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity, iron ion binding;P:response to salt stress;C:unknown;POBFMS.X.H.G.
0.4050.8At5g42650834273AOS (ALLENE OXIDE SYNTHASE)Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity.S.X.H.G.
0.3846.7At5g13220831162JAZ10 (JASMONATE-ZIM-DOMAIN PROTEIN 10)Plants overexpressing At5g13220.3, but not At5g13220.1 showed enhanced insensitivity to MeJa.S.X.H.G.
0.3541.6At5g44050834428MATE efflux family proteinF:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMAS.X.H.G.
0.3338.1At1g17420838314LOX3LipoxygenaseS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
74.699.9E-MEXP-807-raw-cel-1173273116
65.399.8E-MEXP-807-raw-cel-1173273170
62.499.8E-MEXP-807-raw-cel-1173273060
60.199.8E-MEXP-807-raw-cel-1173273223
58.799.8E-MEXP-807-raw-cel-1173273088
47.099.8E-ATMX-6-raw-cel-1308219150
46.599.8E-MEXP-807-raw-cel-1173273196
46.399.8E-MEXP-807-raw-cel-1173273144
46.299.8GSM131134AtGen_B-20_2-6-1_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
45.299.8GSM131120AtGen_B-6_1-6-1_REP_1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.830950At3g51430824306YLS2strictosidine synthase-like proteinC.G.S.X.
0.850856At3g51440824307strictosidine synthase family proteinF:strictosidine synthase activity;P:alkaloid biosynthetic process, biosynthetic process;C:endoplasmic reticulum;BPMOFAC.G.S.X.
0.611e-128460At3g51420824305SSL4 (STRICTOSIDINE SYNTHASE-LIKE 4)F:strictosidine synthase activity;P:alkaloid biosynthetic process, biosynthetic process;C:endomembrane system;BPMOFAC.G.S.X.
0.021e-138At2g43890818993polygalacturonase, putative / pectinase, putativeF:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAC.G.S.X.
0.026e-136At4g13000826913protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MOFPBVAC.G.S.X.
0.016e-136At3g62170825390VGDH2 (Vanguard 1 homolog 2)F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMOC.G.S.X.
0.016e-136At2g15020815991unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.016e-136At2g33260817889tryptophan/tyrosine permease family proteinF:L-tyrosine transmembrane transporter activity;P:amino acid transport;C:membrane;BOPAMFC.G.S.X.
0.026e-136At1g66160842931U-box domain-containing proteinF:ubiquitin-protein ligase activity, binding;P:response to chitin;C:ubiquitin ligase complex;PMOFBVC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.038e-136Glycine maxGmaAffx.23664.1.S1_atCA785235--7e-2At5g27541C.G.S.X.
0.024e+032Hordeum vulgareS0001000007H12F1_atS0001000007H12F1--2e+0At5g11130exostosin family proteinC.G.S.X.
0.024e+034Oryza sativaOsAffx.21374.1.S1_at---0C.G.S.X.
0.021e+132Populus trichocarpaPtpAffx.7228.1.A1_atBP933598hypothetical protein-7e+0Atmg00990-C.G.S.X.
0.029e+032Triticum aestivumTaAffx.62614.1.S1_atBQ609651--6e-2At5g13410immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family proteinC.G.S.X.
0.022e-136Vitis vinifera1607058_atCF372471hypothetical protein LOC100251716-7e-5At2g46110KPHMT1 (KETOPANTOATE HYDROXYMETHYLTRANSFERASE 1)C.G.S.X.
0.024e+032Zea maysZm.8270.1.A1_atAY649984.1thioesterase family protein-5e+0At4g35980unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0009821The chemical reactions and pathways resulting in the formation of alkaloids, nitrogen-containing natural products which are not otherwise classified as nonprotein amino acids, amines, peptides, amines, cyanogenic glycosides, glucosinolates, cofactors, phytohormones, or primary metabolite (such as purine or pyrimidine bases).
LGO:0009058The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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