Gene omics information

Query gene ID At3g51290
Gene name proline-rich family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g51290824292proline-rich family proteinF:unknown;P:N-terminal protein myristoylation;C:unknown;MPOBFVAS.X.H.G.
0.6176.7At4g14200827060unknown proteinF:unknown;P:biological_process unknown;C:unknown;MBOFPAS.X.H.G.
0.6075.7At3g05470819712formin homology 2 domain-containing protein / FH2 domain-containing proteinF:actin binding;P:cellular component organization, actin cytoskeleton organization;C:endomembrane system;MPOFVBAS.X.H.G.
0.5773.8At1g67040843024unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFS.X.H.G.
0.5673.0At5g43020834317leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAS.X.H.G.
0.5267.4At1g02730839467ATCSLD5Encodes a gene similar to cellulose synthase. Knock-out mutant has reduced growth, reduced xylan level and reduced xylan synthase activity in stems.S.X.H.G.
0.5065.3At4g29360829057glycosyl hydrolase family 17 proteinF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to plasma membrane, anchored to membrane;PFOBS.X.H.G.
0.4963.5At3g61310825303DNA-binding family proteinF:DNA binding;P:biological_process unknown;C:cellular_component unknown;PMFOBS.X.H.G.
0.4862.5At4g33260829462CDC20.2putative cdc20 protein (CDC20.2)S.X.H.G.
0.4761.2At3g58650825034unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;OMBFPVS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
181.2100.0GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
81.899.9GSM10442WT Ovule 2GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
71.499.9GSM10441WT Ovule 1GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
67.899.9GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
64.899.8GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
59.999.8GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
57.699.8GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
56.599.8GSM10477lec1-1 24-Hr Seed 1GSE1051Seed development in LEAFY COTYLEDON1 mutants
53.799.8GSM10446WT 24-Hr Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
50.099.8GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.024e-344At1g21740838778unknown proteinF:unknown;P:N-terminal protein myristoylation;C:unknown;MPOFBAC.G.S.X.
0.016e-240At5g55000835591FIP2FH protein interacting protein FIP2C.G.S.X.
0.016e-240At4g14510827098RNA bindingF:RNA binding;P:biological_process unknown;C:chloroplast;POMFBVAC.G.S.X.
0.016e-240At3g07700819961ABC1 family proteinF:unknown;P:unknown;C:chloroplast;OBMPFAVC.G.S.X.
0.032e-138At4g30130829136unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;PMFC.G.S.X.
0.012e-138At4g35240829677unknown proteinF:unknown;P:N-terminal protein myristoylation;C:plasma membrane;PMFOBVC.G.S.X.
0.022e-138At4g23680828468major latex protein-related / MLP-relatedF:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;PC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e-138Glycine maxGmaAffx.20440.1.S1_atBQ298060--2e-1At1g49005CLE11 (CLAVATA3/ESR-RELATED 11)C.G.S.X.
0.023e-240Hordeum vulgareContig11215_atContig11215--1e-3At3g11820SYP121 (SYNTAXIN OF PLANTS 121)C.G.S.X.
0.062e-656Oryza sativaOs09g05387009637.m03102-Protein of unknown function DUF630 domaincontaining protein1e-6At3g51290proline-rich family proteinC.G.S.X.
0.282e-1275Populus trichocarpaPtpAffx.203071.1.S1_atpmrna6078hypothetical protein-1e-12At3g51290proline-rich family proteinC.G.S.X.
0.054e-344Triticum aestivumTa.5909.1.S1_atBJ307101--3e-3At3g51290proline-rich family proteinC.G.S.X.
0.011e+034Vitis vinifera1622204_atCD010127--5e-3At5g48550F-box family protein-relatedC.G.S.X.
0.022e+034Zea maysZmAffx.1530.1.S1_at40794996-12--6e-1At1g34070unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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