Gene omics information

Query gene ID At3g50930
Gene name BCS1 (CYTOCHROME BC1 SYNTHESIS)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.114.1At3g50930824257BCS1 (CYTOCHROME BC1 SYNTHESIS)F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:mitochondrion, plastid;BOMFPAVS.X.H.G.
0.6781.6At4g25810828686XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6)xyloglucan endotransglycosylase-related protein (XTR6)S.X.H.G.
0.5065.3At4g30280829151XTH18 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 18)putative xyloglucan endotransglycosylase/hydrolase, expressed in the mature or basal regions of both the main and lateral roots, but not in the tip of these roots where cell division occurs.S.X.H.G.
0.4050.8At4g26200828726ACS7Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA.S.X.H.G.
0.2319.3At1g14540838016anionic peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
278.6100.0GSM131325AtGen_6-3521_Saltstress-Roots-12.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
272.7100.0E-MEXP-807-raw-cel-1173273088
249.3100.0E-MEXP-807-raw-cel-1173273223
243.1100.0E-MEXP-807-raw-cel-1173273116
218.5100.0E-MEXP-807-raw-cel-1173273060
192.2100.0E-MEXP-807-raw-cel-1173273196
190.1100.0E-MEXP-807-raw-cel-1173273252
187.5100.0GSM131329AtGen_6-3621_Saltstress-Roots-24.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
178.8100.0E-MEXP-807-raw-cel-1173273144
168.4100.0GSM131330AtGen_6-3622_Saltstress-Roots-24.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.282e-20101At3g50940824258AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:endomembrane system;BOMFPAVC.G.S.X.
0.137e-1789At5g17760831644AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:unknown;C:plasma membrane;BOMFPAVC.G.S.X.
0.061e-1585At5g17740831642AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:biological_process unknown;C:cellular_component unknown;BOMFPAVC.G.S.X.
0.044e-1273At5g57480835852AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:endomembrane system;BOMFPAVC.G.S.X.
0.066e-1169At2g18190816332AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:response to salt stress;C:endomembrane system;BOMFPAVC.G.S.X.
0.054e-963At5g40000833997AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:biological_process unknown;C:endomembrane system;BOMFPAVC.G.S.X.
0.042e-861At4g25835828689AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:biological_process unknown;C:endomembrane system;BOMFPAVC.G.S.X.
0.076e-859At4g05380825886AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:biological_process unknown;C:cellular_component unknown;BOMFPAVC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.085e-344Glycine maxGma.2267.1.S1_atBE821081--5e-7At4g05380AAA-type ATPase family proteinC.G.S.X.
0.052e-344Hordeum vulgareContig15757_atContig15757--3e-3At3g50930BCS1 (CYTOCHROME BC1 SYNTHESIS)C.G.S.X.
0.067e-654Oryza sativaOs05g0588800AK111042.1--1e-4At5g17750AAA-type ATPase family proteinC.G.S.X.
0.124e-1687Populus trichocarpaPtpAffx.208238.1.S1_atpmrna16401hypothetical protein-2e-16At3g50930BCS1 (CYTOCHROME BC1 SYNTHESIS)C.G.S.X.
0.032e-448Triticum aestivumTaAffx.12215.2.S1_atBJ280213--5e-2At4g05340ATP bindingC.G.S.X.
0.113e-1065Vitis vinifera1607604_atCF213890hypothetical protein LOC100241723-1e-14At5g17760AAA-type ATPase family proteinC.G.S.X.
0.026e+032Zea maysZmAffx.1087.1.S1_s_atAW036957herbicide safener binding protein1-5e+0At4g19690IRT1 (iron-regulated transporter 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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