Gene omics information

Query gene ID At3g50900
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3032.1At3g50900824254unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.2522.6At4g13180826932short-chain dehydrogenase/reductase (SDR) family proteinF:oxidoreductase activity, binding, catalytic activity;P:response to arsenic;C:unknown;BOMFPAVS.X.H.G.
0.2014.4At1g76680844001OPR1Encodes a a member of an alpha/beta barrel fold family of FMN-containing oxidoreductases. One of two closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Up-regulated by senescence and jasmonic acid. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid.S.X.H.G.
0.135.8At1g62300842527WRKY6transcription factor WRKY6 (WRKY6)S.X.H.G.
0.040.9At4g22530828348embryo-abundant protein-relatedF:methyltransferase activity;P:metabolic process;C:cellular_component unknown;BPFMOAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
91.799.9E-MEXP-1443-raw-cel-1581869803
89.899.9E-MEXP-1443-raw-cel-1581869632
84.099.9E-MEXP-1443-raw-cel-1581869745
77.299.9GSM205156protoplast_controlDNA_rep1GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cells
71.799.9GSM133968Birnbaum_1-19_LRC-1_Rep1_ATH1GSE5749A gene expression map of the Arabidopsis root
71.699.9E-MEXP-1443-raw-cel-1581869921
62.699.8E-MEXP-1443-raw-cel-1581869688
61.299.8GSM133991Birnbaum_1-24_gl2-3_Rep3_ATH1GSE5749A gene expression map of the Arabidopsis root
55.499.8GSM205160protoplast_controlDNA_rep2GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cells
50.799.8GSM133969Birnbaum_1-20_LRC-2_Rep2_ATH1GSE5749A gene expression map of the Arabidopsis root
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.197e-444At5g66490836781unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PC.G.S.X.
0.036e-134At1g12020837754unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;POC.G.S.X.
0.023e+032At5g47790834830forkhead-associated domain-containing protein / FHA domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MBOPFAC.G.S.X.
0.033e+032At5g26667832710PYR6encodes a uridine 5'-monophosphate (UMP)/cytidine 5'-monophosphate (CMP) kinase.C.G.S.X.
0.023e+032At4g29690829090type I phosphodiesterase/nucleotide pyrophosphatase family proteinF:hydrolase activity, catalytic activity;P:metabolic process, nucleotide metabolic process;C:endomembrane system;MBOFPAVC.G.S.X.
0.013e+032At4g21326827882ATSBT3.12 (SUBTILASE 3.12)F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAMC.G.S.X.
0.023e+032At4g28430828960reticulon family proteinF:unknown;P:biological_process unknown;C:endoplasmic reticulum, chloroplast;MPOFC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e+032Glycine maxPsAffx.C26000077_atPsAffx.C26000077--4e+0At3g50900unknown proteinC.G.S.X.
0.031e+032Hordeum vulgareContig8914_s_atContig8914--3e-1At5g03660unknown proteinC.G.S.X.
0.035e+032Oryza sativaOs02g0131000AK062905.1-Conserved hypothetical protein5e+0At3g50900unknown proteinC.G.S.X.
0.079e-134Populus trichocarpaPtpAffx.86209.1.S1_atCV272652hypothetical protein-1e-7At5g66490unknown proteinC.G.S.X.
0.053e+032Triticum aestivumTaAffx.77613.1.S1_atCA745322--3e+0At4g16024unknown proteinC.G.S.X.
0.043e+030Vitis vinifera1622623_atCF514619hypothetical protein LOC100258799-1e+0At1g64680unknown proteinC.G.S.X.
0.041e+032Zea maysZm.4767.1.A1_atAI739901glutamyl-tRNA synthetase, cytoplasmic-3e+0At3g50900unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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