Gene omics information

Query gene ID At3g49870
Gene name ATARLA1C (ADP-ribosylation factor-like A1C)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6781.6At3g49870824149ATARLA1C (ADP-ribosylation factor-like A1C)A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.S.X.H.G.
0.7586.9At1g10740837617unknown proteinF:unknown;P:glycerol biosynthetic process;C:endomembrane system;BOPFMS.X.H.G.
0.7284.8At5g47620834812heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putativeF:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPOFBAS.X.H.G.
0.6882.2At5g61960836317AML1 (ARABIDOPSIS MEI2-LIKE PROTEIN 1)A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML1 is a member of two sister clades of mei2-like gene family, AML1 through AML5 and belongs to the clade named ALM14. AML1 is expressed during early embryo development, particularly along embryonic axis at torpedo stage, in shoot apex (weaker expression) and in the organogenic regions of floral apices.S.X.H.G.
0.6680.1At3g07880819979Rho GDP-dissociation inhibitor family proteinF:Rho GDP-dissociation inhibitor activity;P:biological_process unknown;C:cytoplasm;MFPOS.X.H.G.
0.6579.6At3g14595820686unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOS.X.H.G.
0.6478.9At3g55430824709glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putativeF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cell wall;PFOBS.X.H.G.
0.6478.9At3g54690824634sugar isomerase (SIS) domain-containing protein / CBS domain-containing proteinF:isomerase activity, sugar binding;P:carbohydrate metabolic process;C:unknown;BOAFPMVS.X.H.G.
0.6478.9At3g12620820442protein phosphatase 2C family protein / PP2C family proteinF:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;PMOFBVS.X.H.G.
0.6378.1At1g54290841870eukaryotic translation initiation factor SUI1, putativeF:translation initiation factor activity;P:translational initiation, translation;C:cellular_component unknown;MPFOAVBS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
137.199.9E-MEXP-1138-raw-cel-1432772906
131.799.9E-MEXP-1138-raw-cel-1432773034
129.499.9E-MEXP-1138-raw-cel-1432772714
122.399.9E-MEXP-1138-raw-cel-1432772810
118.999.9E-MEXP-1138-raw-cel-1432773290
110.099.9E-MEXP-1138-raw-cel-1432773386
104.199.9GSM239251Columbia glabrous (C24) wild type pollenGSE9408Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
103.299.9E-MEXP-1138-raw-cel-1432773194
95.599.9E-MEXP-1138-raw-cel-1432772970
88.099.9GSM239252Columbia glabrous (C24) wild type stamenGSE9408Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.870650At5g67560836892ATARLA1D (ADP-ribosylation factor-like A1D)A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.C.G.S.X.
0.849e-174609At3g49860824148ATARLA1B (ADP-ribosylation factor-like A1B)A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.C.G.S.X.
0.342e-42173At5g37680833747ATARLA1A (ADP-ribosylation factor-like A1A)A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARL GTPases.C.G.S.X.
0.037e-238At1g56330842086ATSAR1B (SECRETION-ASSOCIATED RAS 1 B)Encodes a small GTP-binding protein implicated in ER to cis-Golgi transport of other proteins. A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. The protein is found associated to the ER and free in the cytosol.C.G.S.X.
0.011e+034At5g42020834207BIP2luminal binding protein (BiP)C.G.S.X.
0.011e+034At5g07400830631forkhead-associated domain-containing protein / FHA domain-containing proteinF:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, phosphoric diester hydrolase activity, zinc ion binding, nucleic acid binding;P:DNA repair;C:nucleus;MFOPBC.G.S.X.
0.031e+034At5g08070830701TCP17 (TCP DOMAIN PROTEIN 17)TCP gene involved in heterochronic control of leaf differentiation.C.G.S.X.
0.021e+034At4g32000829331protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.643e-54212Glycine maxGmaAffx.92317.1.S1_atCF808042--2e-54At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)C.G.S.X.
0.403e-39161Hordeum vulgareContig9224_atContig9224--1e-38At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)C.G.S.X.
0.342e-37157Oryza sativaOs03g0200800AK112007.1--5e-35At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)C.G.S.X.
0.553e-60232Populus trichocarpaPtp.625.1.S1_atCK087324hypothetical protein-4e-60At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)C.G.S.X.
0.362e-42173Triticum aestivumTa.8631.1.S1_atCA690636--8e-28At5g67560ATARLA1D (ADP-ribosylation factor-like A1D)C.G.S.X.
0.591e-99361Vitis vinifera1619019_atCF213490hypothetical protein LOC100243336-2e-102At5g67560ATARLA1D (ADP-ribosylation factor-like A1D)C.G.S.X.
0.198e-1269Zea maysZm.14791.1.A1_atCF628382ADP-ribosylation factor-like protein 8B-7e-9At5g67560ATARLA1D (ADP-ribosylation factor-like A1D)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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