Gene omics information

Query gene ID At3g49110
Gene name PRXCA (PEROXIDASE CA)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2014.4At3g49110824072PRXCA (PEROXIDASE CA)Class III peroxidase Perx33. Expressed in roots. Located in the cell wall. Involved in cell elongation. Expression activated by light. May play a role in generating H2O2 during defense response.S.X.H.G.
0.5065.3At3g04720819632PR4 (PATHOGENESIS-RELATED 4)Encodes a protein similar to the antifungal chitin-binding protein hevein from rubber tree latex. mRNA levels increase in response to ethylene and turnip crinkle virus infection.S.X.H.G.
0.4050.8At2g02930814822ATGSTF3 (GLUTATHIONE S-TRANSFERASE F3)Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).S.X.H.G.
0.135.8At1g70810843418C2 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MPFOS.X.H.G.
0.103.4At3g26210822222CYP71B23putative cytochrome P450S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
27.399.7GSM88049csn4-1_mutant replicate 1GSE3865CSN4-1 mutant analysis
24.799.6GSM88050csn4-1_mutant replicate 2GSE3865CSN4-1 mutant analysis
21.099.6GSM245919csn3-1 mutant dark replicate 1GSE9728COP9 signalosome (csn) mutant analysis
20.199.6GSM245912csn3-1 mutant light replicate 3GSE9728COP9 signalosome (csn) mutant analysis
19.099.5GSM245915csn5 (csn5a-2 csn5b) mutant light replicate 3GSE9728COP9 signalosome (csn) mutant analysis
17.999.5GSM245913csn5 (csn5a-2 csn5b) mutant light replicate 1GSE9728COP9 signalosome (csn) mutant analysis
17.099.5GSM245911csn3-1 mutant light replicate 2GSE9728COP9 signalosome (csn) mutant analysis
16.199.5GSM245920csn3-1 mutant dark replicate 2GSE9728COP9 signalosome (csn) mutant analysis
15.399.4GSM88051csn4-1_mutant replicate 3GSE3865CSN4-1 mutant analysis
15.299.4GSM128720Pieterse_1-6_avrPstDC3000-24h_Rep1_ATH1GSE5525Transcriptome changes of Arabidopsis during pathogen and insect attack
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.8801310At3g49120824073PRXCB (PEROXIDASE CB)Class III peroxidase Perx34. Expressed in roots, leaves and stems. Located in the cell wall. Involved in cell elongation. Expression activated by light. May play a role in generating H2O2 during defense response.C.G.S.X.
0.730755At3g32980823067peroxidase 32 (PER32) (P32) (PRXR3)F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:cell wall, vacuole, membrane;PFOC.G.S.X.
0.474e-54212At4g08770826447peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:vacuole;POFC.G.S.X.
0.474e-48192At4g08780826448peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:vacuole;POFMC.G.S.X.
0.227e-22105At2g38390818420peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to salt stress;C:endomembrane system;PFOC.G.S.X.
0.162e-1997At2g38380818419peroxidase 22 (PER22) (P22) (PRXEA) / basic peroxidase EF:electron carrier activity, peroxidase activity, heme binding;P:response to salt stress;C:plant-type cell wall;PFOC.G.S.X.
0.049e-961At5g19890832111peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:nucleus, cytoplasm;PFOBC.G.S.X.
0.046e-756At5g06720830561peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOMVC.G.S.X.
0.046e-756At4g16270827322peroxidase 40 (PER40) (P40)F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.075e-550Glycine maxGma.17816.2.S1_s_atBE020641--2e-10At1g68850peroxidase, putativeC.G.S.X.
0.023e-136Hordeum vulgareContig23893_atContig23893--4e+0At4g18880AT-HSFA4AC.G.S.X.
0.037e-550Oryza sativaOs08g0302000AK106760.1-Peroxidase 40 precursor (EC 1.11.1.7) (AtperoxP40)3e-6At4g16270peroxidase 40 (PER40) (P40)C.G.S.X.
0.095e-550Populus trichocarpaPtpAffx.25548.2.S1_atD30653.1hypothetical protein-2e-4At4g08780peroxidase, putativeC.G.S.X.
0.041e-138Triticum aestivumTaAffx.110385.1.S1_atCA659498--7e-2At3g49110PRXCA (PEROXIDASE CA)C.G.S.X.
0.033e-961Vitis vinifera1614361_atCD799499hypothetical protein LOC100242338-3e-8At2g22420peroxidase 17 (PER17) (P17)C.G.S.X.
0.032e-446Zea maysZm.404.1.S1_atAF037033.1anionic peroxidase H-8e-3At5g66390peroxidase 72 (PER72) (P72) (PRXR8)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0006800The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH).
XGO:0042742Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.
XGO:0050832Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.
XGO:0009416A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light.
XGO:0009826The process by which a cell irreversibly increases in size in one [spatial] dimension or along one axis, resulting in the morphogenesis of the cell.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00413Link to KaPPA-View 4Peroxidase, class III



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00360Link to KEGG PATHWAYPhenylalanine metabolism
00680Link to KEGG PATHWAYMethane metabolism
00940Link to KEGG PATHWAYPhenylpropanoid biosynthesis
01061Link to KEGG PATHWAYBiosynthesis of phenylpropanoids
01100Link to KEGG PATHWAYMetabolic pathways
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