Gene omics information

Query gene ID At3g48360
Gene name BT2 (BTB AND TAZ DOMAIN PROTEIN 2)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4457.2At3g48360823994BT2 (BTB AND TAZ DOMAIN PROTEIN 2)encodes a protein (BT2) that is an essential component of the TAC1-mediated telomerase activation pathway. Acts redundantly with BT3 and BT1 during female gametophyte development and with BT3 during male gametophyte development.S.X.H.G.
0.5065.3At5g49360834996BXL1 (BETA-XYLOSIDASE 1)Encodes a bifunctional {beta}-D-xylosidase/{alpha}-L-arabinofuranosidase required for pectic arabinan modification. Located in the extracellular matrix. Gene is expressed specifically in tissues undergoing secondary wall thickening. This is a member of glycosyl hydrolase family 3 and has six other closely related members.S.X.H.G.
0.2522.6At2g20670816595unknown proteinF:unknown;P:unknown;C:chloroplast;POS.X.H.G.
0.2217.5At5g20250832147DIN10 (DARK INDUCIBLE 10)encodes a member of glycosyl hydrolase family 36. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.S.X.H.G.
0.1811.4At3g49790824141ATP bindingF:ATP binding;P:biological_process unknown;C:unknown;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
25.599.7GSM205159protoplast_KIN10_rep1GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cells
22.399.6GSM67112Arabidopsis_Seedling04GSE3056Arabidopsis Pollination Study
21.799.6E-TABM-63-raw-cel-681137195
21.299.6GSM25316648h into an extended nightCGSE10016Expression data of Arabidopsis thaliana rosettes in an extended night
19.799.6GSM25316324h into an extended nightBGSE10016Expression data of Arabidopsis thaliana rosettes in an extended night
19.699.6E-TABM-63-raw-cel-681137124
19.099.5GSM142778AM002_ATH1_A3-MCCOR-GFAGSE6169Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.
18.999.5E-MEXP-513-raw-cel-829814430
18.299.5GSM142772AM002_ATH1_A7-MCCOR-GFBGSE6169Seedling transcriptome affected by a far-red light preconditioning treatment to block chloroplast development.
17.599.5E-TABM-63-raw-cel-681137052
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.491e-29131At5g63160836437BT1 (BTB AND TAZ DOMAIN PROTEIN 1)BTB and TAZ domain protein. Short-lived nuclear-cytoplasmic protein targeted for degradation by the 26S proteosome pathway. Acts redundantly with BT2 and BT3 during female gametophyte development.C.G.S.X.
0.015e-136At5g59190836037subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:response to cadmium ion, proteolysis;C:cellular_component unknown;BPOFAMC.G.S.X.
0.015e-136At2g17010816204mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:membrane;BOPFAMC.G.S.X.
0.012e+034At5g01660830423-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPBVFAC.G.S.X.
0.012e+034At5g46240834666KAT1 (POTASSIUM CHANNEL IN ARABIDOPSIS THALIANA 1)Encodes a potassium channel protein (KAT1). ABA triggers KAT1 endocytosis both in epidermal cells as well as guard cells. Upon removal of ABA, KAT1 is recycled back to the plasma membrane. KAT1 is localized within 0.50.6 μm diameter microdomains at the plasma membrane surface.C.G.S.X.
0.022e+034At3g27250822344unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.022e+034At1g03950839362VPS2.3 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2.3)F:unknown;P:vesicle-mediated transport;C:ESCRT III complex;MPFOBC.G.S.X.
0.012e+034At1g73430843677sec34-like family proteinF:molecular_function unknown;P:intracellular protein transport;C:chloroplast, membrane, cis-Golgi network;MFOPBC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-138Glycine maxGmaAffx.63484.1.S1_atBG237220--9e-1At5g63160BT1 (BTB AND TAZ DOMAIN PROTEIN 1)C.G.S.X.
0.021e+034Hordeum vulgareContig6595_atContig6595--2e+0At1g12440zinc finger (AN1-like) family proteinC.G.S.X.
0.024e+034Oryza sativaOs05g02203669633.m01151--2e-1At3g60670zinc-binding protein, putativeC.G.S.X.
0.163e-654Populus trichocarpaPtp.1087.1.A1_atAJ768109hypothetical protein-3e-6At3g48360BT2 (BTB AND TAZ DOMAIN PROTEIN 2)C.G.S.X.
0.032e+034Triticum aestivumTa.8027.3.S1_a_atCA681612--1e+0At3g48360BT2 (BTB AND TAZ DOMAIN PROTEIN 2)C.G.S.X.
0.102e-136Vitis vinifera1607082_atCF516413hypothetical protein LOC100260390-3e-1At3g48360BT2 (BTB AND TAZ DOMAIN PROTEIN 2)C.G.S.X.
0.024e+032Zea maysZmAffx.45.1.A1_atAI664925amino acid permease-8e-1At5g52160protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0007623Any biological process in an organism that recurs with a regularity of approximately 24 hours.
XGO:0009743A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbohydrate stimulus.
XGO:0010167A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrate stimulus.
XGO:0080134Any process that modulates the frequency, rate or extent of a response to stress. Response to stress is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).
XGO:0009553The process whose specific outcome is the progression of the embryo sac over time, from its formation to the mature structure. The process begins with the meiosis of the megasporocyte to form four haploid megaspores. Three of the megaspores disintegrate, and the fourth undergoes mitosis giving rise to a binucleate syncytial embryo sac. The two haploid nuclei migrate to the opposite poles of the embryo sac and then undergo two rounds of mitosis generating four haploid nuclei at each pole. One nucleus from each set of four migrates to the center of the cell. Cellularization occurs, resulting in an eight-nucleate seven-celled structure. This structure contains two synergid cells and an egg cell at the micropylar end, and three antipodal cells at the other end. A binucleate endosperm mother cell is formed at the center. The two polar nuclei fuse resulting in a mononucleate diploid endosperm mother cell. The three antipodal cells degenerate.
XGO:0009555The process whose specific outcome is the progression of the pollen grain over time, from its formation to the mature structure. The process begins with the meiosis of the microsporocyte to form four haploid microspores. The nucleus of each microspore then divides by mitosis to form a two-celled organism, the pollen grain, that contains a tube cell as well as a smaller generative cell. The pollen grain is surrounded by an elaborate cell wall. In some species, the generative cell immediately divides again to give a pair of sperm cells. In most flowering plants, however this division takes place later, in the tube that develops when a pollen grain germinates.
XGO:0009733A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an auxin stimulus.
XGO:0051973Any process that activates or increases the frequency, rate or extent of telomerase activity, the catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1).
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00903Link to KEGG PATHWAYLimonene and pinene degradation
00945Link to KEGG PATHWAYStilbenoid, diarylheptanoid and gingerol biosynthesis
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