Gene omics information

Query gene ID At3g48040
Gene name ROP10 (RHO-RELATED PROTEIN FROM PLANTS 10)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3643.6At3g48040823959ROP10 (RHO-RELATED PROTEIN FROM PLANTS 10)Encodes a member of the Rop subfamily of Rho GTPases in Arabidopsis that contains a putative farnesylation motif. It is localized to the plasma membrane and involved in the negative regulation of ABA signalling.S.X.H.G.
0.5570.6At5g06430830531thioredoxin-relatedF:unknown;P:unknown;C:unknown;BPOS.X.H.G.
0.5570.6At5g10700830935aminoacyl-tRNA hydrolase/ protein tyrosine phosphataseF:aminoacyl-tRNA hydrolase activity, protein tyrosine phosphatase activity;P:protein amino acid dephosphorylation, translation;C:unknown;MOPFS.X.H.G.
0.4761.2At4g37020829856unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPBVS.X.H.G.
0.4050.8At2g42240818824nucleic acid binding / nucleotide bindingF:nucleotide binding, nucleic acid binding;P:biological_process unknown;C:unknown;MFPOS.X.H.G.
0.3643.6At3g24030821988hydroxyethylthiazole kinase family proteinF:catalytic activity, hydroxyethylthiazole kinase activity;P:thiamin biosynthetic process;C:cellular_component unknown;BOFAPMS.X.H.G.
0.2930.3At1g29040839778unknown proteinF:unknown;P:unknown;C:chloroplast, vacuole;BOPS.X.H.G.
0.2014.4At1g27410839631DNA cross-link repair protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOBAS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
35.599.7GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
27.099.7GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
25.399.6GSM133768Lindsey_1-20_torpedo-basal_Rep5_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
25.199.6GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
20.999.6GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
20.299.6GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
18.599.5GSM131105Broadley_1-3_A3-Bo-P2-phosphate-starved_Rep2_ATH1GSE5614Changes in Gene Expression in Brassica oleracea Shoots during Phosphate Starvation (Cross-species study)
18.399.5GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
17.999.5GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
16.499.5GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.801e-170599At5g62880836408ARAC10A member of ROP GTPase gene family.C.G.S.X.
0.351e-1997At5g45970834637ARAC2 (ARABIDOPSIS RAC-LIKE 2)Encodes a Rac-like protein ARAC2. A member of ROP GTPase gene family.C.G.S.X.
0.264e-1995At4g28950829016ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9)A member of ROP GTPase gene family.C.G.S.X.
0.282e-1789At1g20090838598ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2)Member of the Rho GTPase family. Functions to organize the microtubular cytoskeleton in combination with RIC1 and RIC4. These interactions affect pavement cell morphogenesis and pollen tube growth. ROP2 expression is stimulated by brassinosteroid treatment. Inhibit light-induced stomatal opening.C.G.S.X.
0.211e-1273At1g75840843917ARAC5 (RAC-LIKE GTP BINDING PROTEIN 5)Belongs to the plant-specific ROP group of Rho GTPases; localized to the plasma membrane of tips of root hairs; involved in polar growth control.C.G.S.X.
0.199e-1167At4g35020829654ARAC3 (ARABIDOPSIS RAC-LIKE 3)A member of ROP GTPase gene family; Encodes a Rho-like GTP binding protein.C.G.S.X.
0.223e-756At4g35950829750ARAC6 (ARABIDOPSIS RAC-LIKE 6)A member of ROP GTPases gene family-like. GTP binding protein Arac6.C.G.S.X.
0.048e-548At5g01940831786eukaryotic translation initiation factor 2B family protein / eIF-2B family proteinF:translation initiation factor activity;P:translational initiation;C:cellular_component unknown;AMOFPC.G.S.X.
0.098e-548At2g44690819077ARAC9A member of ROP GTPase gene family.C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.447e-37155Glycine maxGmaAffx.76293.1.S1_atBI427326--6e-51At4g28950ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9)C.G.S.X.
0.282e-1375Hordeum vulgareContig12824_atContig12824--6e-13At3g48040ROP10 (RHO-RELATED PROTEIN FROM PLANTS 10)C.G.S.X.
0.426e-44178Oryza sativaOs06g0234200AF380335.1-RAC-ROP-like G-protein5e-29At5g62880ARAC10C.G.S.X.
0.442e-31137Populus trichocarpaPtpAffx.22863.1.S1_atCV230489hypothetical protein-5e-60At5g62880ARAC10C.G.S.X.
0.304e-1685Triticum aestivumTaAffx.57791.1.S1_atCA625100--2e-26At5g62880ARAC10C.G.S.X.
0.365e-25113Vitis vinifera1608204_atCF209964hypothetical protein LOC100266265-4e-94At4g28950ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9)C.G.S.X.
0.442e-37155Zea maysZm.290.1.S1_atBM079195Rho-related protein from plants 5-9e-37At3g48040ROP10 (RHO-RELATED PROTEIN FROM PLANTS 10)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
SGO:0009738A series of molecular signals mediated by the detection of abscisic acid.
SGO:0009788Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by abscisic acid.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage