Gene omics information

Query gene ID At3g47380
Gene name invertase/pectin methylesterase inhibitor family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3643.6At3g47380823892invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.5773.8At2g43620818964chitinase, putativeF:chitin binding, chitinase activity;P:response to salt stress;C:apoplast;PBFOVMS.X.H.G.
0.5065.3At2g17740816283DC1 domain-containing proteinF:unknown;P:unknown;C:cellular_component unknown;POS.X.H.G.
0.5065.3At4g23210828420protein kinase family proteinEncodes a Cysteine-rich receptor-like kinase (CRK13). Overexpression of CRK13 leads to hypersensitive response cell death, and induces defense against pathogens by causing increased accumulation of salicylic acid.S.X.H.G.
0.4457.2At4g22470828342protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;MBOPFVAS.X.H.G.
0.4050.8At1g49000841322unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
302.2100.0GSM142851MG001_ATH1_A4-Torres-2N1GSE6176Impact of Type III effectors on plant defense responses
258.9100.0GSM142853MG001_ATH1_A6-Torres-2N6GSE6176Impact of Type III effectors on plant defense responses
244.0100.0GSM142852MG001_ATH1_A5-Torres-2N3GSE6176Impact of Type III effectors on plant defense responses
189.9100.0GSM131141AtGen_B-27_2-6-4_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
186.1100.0GSM131113AtGen_B-41_3-6-4_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
177.4100.0GSM131127AtGen_B-13_1-6-4_REP1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
165.6100.0GSM142833MG001_ATH1_A10-Torres-5N1GSE6176Impact of Type III effectors on plant defense responses
142.999.9GSM142835MG001_ATH1_A13-Torres-4N1GSE6176Impact of Type III effectors on plant defense responses
113.999.9GSM131111AtGen_B-39_3-4-4_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
95.199.9GSM131139AtGen_B-25_2-4-4_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.423e-23109At5g62350836356invertase/pectin methylesterase inhibitor family protein / DC 1.2 homolog (FL5-2I22)F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:response to salt stress;C:endomembrane system;PC.G.S.X.
0.042e-240At5g62330836354-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.137e-238At5g62340836355invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
0.037e-238At2g36130818186peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putativeF:peptidyl-prolyl cis-trans isomerase activity;P:protein folding;C:cellular_component unknown;OBMFPAC.G.S.X.
0.023e-136At4g18160827541KCO6Encodes AtTPK3 (KCO6), a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins.AtTPK3 is targeted to the vacuolar membrane. May form homomeric ion channels in vivo.C.G.S.X.
0.011e+034At5g39710833967EMB2745 (EMBRYO DEFECTIVE 2745)F:unknown;P:embryonic development ending in seed dormancy;C:unknown;POMFBAC.G.S.X.
0.021e+034At4g11350826737transferase, transferring glycosyl groupsF:transferase activity, transferring glycosyl groups;P:biological_process unknown;C:cellular_component unknown;PFMOC.G.S.X.
0.011e+034At3g23120821887AtRLP38 (Receptor Like Protein 38)F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAVC.G.S.X.
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Orthologous genes



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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e-136Glycine maxGma.4444.3.S1_atCD412673--3e-18At4g18040EIF4E (EUKARYOTIC TRANSLATION INITATION FACTOR 4E)C.G.S.X.
0.032e+032Hordeum vulgareEBro08_SQ003_B08_atEBro08_SQ003_B08--4e+0Atmg00860-C.G.S.X.
Os02g02282250.056e-1Oryza sativaOs08g03420009636.m02487--6e-1At5g62770unknown proteinC.G.S.X.
0.032e+034Populus trichocarpaPtpAffx.18340.1.S1_atCV263209histone H3-8e-39At5g10400histone H3C.G.S.X.
0.045e+032Triticum aestivumTaAffx.24964.1.S1_atCA709128--3e+0At3g17100transcription factorC.G.S.X.
0.031e+032Vitis vinifera1615480_atBQ799376hypothetical protein LOC100247007-2e-6At4g26210mitochondrial ATP synthase g subunit family proteinC.G.S.X.
0.042e+032Zea maysZm.6049.3.A1_a_atAI734480phosphatidylinositol transporter/ transporter-3e-3At1g76640calmodulin-related protein, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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