Gene omics information

Query gene ID At3g47090
Gene name leucine-rich repeat transmembrane protein kinase, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6781.6At3g47090823862leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:chloroplast;MPOBFVAS.X.H.G.
0.3643.6At4g23320828431protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:unknown;MPOBFVAS.X.H.G.
0.1912.7At2g241603768109-F:unknown;P:unknown;C:unknownS.X.H.G.
0.1710.2At1g17600838336disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAS.X.H.G.
0.114.1At2g29120817460ATGLR2.7member of Putative ligand-gated ion channel subunit familyS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
297.6100.0GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
186.5100.0GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
119.499.9GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
113.099.9GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
112.199.9GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
111.899.9GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
111.499.9GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
106.799.9GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
102.899.9GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
101.899.9GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.5901152At3g47570823911leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;MPOBFVAC.G.S.X.
0.8101076At3g47580823912leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.191e-22109At5g20480832170EFR (EF-TU RECEPTOR)Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu.C.G.S.X.
0.211e-1999At5g39390833935leucine-rich repeat family protein / protein kinase family proteinF:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.134e-1067At3g47110823864leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.012e-346At1g07550837269leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAC.G.S.X.
0.016e-344At5g55830835677lectin protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.013e-242At4g18250827551receptor serine/threonine kinase, putativeF:transmembrane receptor protein serine/threonine kinase activity, kinase activity;P:protein amino acid phosphorylation;C:unknown;MPOBFVAC.G.S.X.
0.023e-242At1g78530844189protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e-140Glycine maxGmaAffx.37949.1.A1_atBU548506--2e-2At3g47570leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.023e-344Hordeum vulgareContig24385_atContig24385--2e-3At1g61460S-locus protein kinase, putativeC.G.S.X.
0.035e-242Oryza sativaOs08g0248100AK111640.1-Protein kinase domain containing protein3e-2At3g47090leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.042e-656Populus trichocarpaPtpAffx.225172.1.S1_atpmrna44319hypothetical protein-2e-6At3g47090leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.011e-140Triticum aestivumTa.26189.1.A1_atCD452631--1e-1At5g39390leucine-rich repeat family protein / protein kinase family proteinC.G.S.X.
0.012e-344Vitis vinifera1608157_atBM437416--3e-7At4g11530kinaseC.G.S.X.
0.012e-138Zea maysZm.3405.1.A1_atAI737775--4e-4At2g30940protein kinase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006468The process of introducing a phosphate group on to a protein.
CGO:0007169The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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