Gene omics information

Query gene ID At3g47040
Gene name glycosyl hydrolase family 3 protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5065.3At3g47040823857glycosyl hydrolase family 3 proteinF:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:cellular_component unknown;BOFPAMS.X.H.G.
0.8391.4At5g11920831065AtcwINV6 (6-&1-fructan exohydrolase)Encodes a protein with fructan exohydrolase (FEH) activity acting on both inulin and levan-type fructans (1- and 6-FEH). The enzyme does not have invertase activity.S.X.H.G.
0.7385.5At1g24320839048alpha-glucosidase, putativeF:mannosyl-oligosaccharide glucosidase activity, alpha-glucosidase activity, catalytic activity;P:oligosaccharide metabolic process;C:cellular_component unknown;MFOBPAS.X.H.G.
0.7385.5At3g46500823803oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity, iron ion binding;P:biological_process unknown;C:cellular_component unknown;POBFMS.X.H.G.
0.5974.7At3g11390820311DC1 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFBVS.X.H.G.
0.5570.6At3g13090820497ATMRP8member of MRP subfamilyS.X.H.G.
0.5368.6At5g092908307883'(2'),5'-bisphosphate nucleotidase, putative / inositol polyphosphate 1-phosphatase, putativeF:3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity;P:sulfur metabolic process;C:unknown;BOMFPAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
137.599.9GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
103.099.9GSM184533Protoplasted root cells 2hr KCl control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
96.699.9GSM184520Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
96.499.9GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
95.399.9GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
90.699.9GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
81.399.9GSM184539Whole roots 2hr KCl control treated then frozen, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
77.899.9GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
75.799.9GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
71.199.9GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.8101025At3g47010823854hydrolase, hydrolyzing O-glycosyl compoundsF:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:cellular_component unknown;BOFPAMC.G.S.X.
0.800948At3g47000823853glycosyl hydrolase family 3 proteinF:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:cellular_component unknown;BOFPAMC.G.S.X.
0.770783At3g47050823858glycosyl hydrolase family 3 proteinF:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:vacuole;BOFPAMC.G.S.X.
0.043e-448At5g20950832220glycosyl hydrolase family 3 proteinF:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:cell wall, membrane, plant-type cell wall;BOFPAMC.G.S.X.
0.016e-240At5g50520835120nodulin family proteinF:unknown;P:unknown;C:endomembrane system;BOPFMAC.G.S.X.
0.016e-240At5g50630835132nodulin family proteinF:unknown;P:unknown;C:endomembrane system;BOPFMAC.G.S.X.
0.036e-240At5g04885830368glycosyl hydrolase family 3 proteinF:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:plasma membrane, anchored to membrane;BOFPAMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.049e-550Glycine maxGmaAffx.57563.1.S1_atAW733781--7e-8At5g04885glycosyl hydrolase family 3 proteinC.G.S.X.
0.072e-1997Hordeum vulgareContig4970_atContig4970--1e-9At5g20950glycosyl hydrolase family 3 proteinC.G.S.X.
0.063e-552Oryza sativaOs02g01314009630.m00291-Beta-D-glucan exohydrolase, isoenzyme ExoII (EC3.2.1.58)4e-3At5g20950glycosyl hydrolase family 3 proteinC.G.S.X.
0.161e-1379Populus trichocarpaPtpAffx.204922.1.S1_atpmrna9736hypothetical protein-4e-12At3g47000glycosyl hydrolase family 3 proteinC.G.S.X.
0.071e+036Triticum aestivumTaAffx.113276.1.S1_atCA616668--1e-21At5g04885glycosyl hydrolase family 3 proteinC.G.S.X.
0.022e-240Vitis vinifera1607374_atCF404162hypothetical protein LOC100246224-1e-13At5g20950glycosyl hydrolase family 3 proteinC.G.S.X.
0.045e-22105Zea maysZm.6303.1.S1_atAF064707.1--8e-27At5g20950glycosyl hydrolase family 3 proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0005975The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00412Link to KaPPA-View 4Glycoside Hydrolase



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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