Gene omics information

Query gene ID At3g46940
Gene name deoxyuridine 5'-triphosphate nucleotidohydrolase family
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g46940823847deoxyuridine 5'-triphosphate nucleotidohydrolase familyF:hydrolase activity, dUTP diphosphatase activity;P:2'-deoxyribonucleotide metabolic process, dUTP metabolic process;C:cellular_component unknown;BOVMFPAS.X.H.G.
0.4152.4At2g3760081833760S ribosomal protein L36 (RPL36A)F:structural constituent of ribosome;P:translation;C:cytosolic large ribosomal subunit, ribosome;MOPFS.X.H.G.
0.3133.8At4g1045082663760S ribosomal protein L9 (RPL90D)F:structural constituent of ribosome;P:translation;C:cytosolic ribosome, cytosolic large ribosomal subunit, large ribosomal subunit;BMPOAFS.X.H.G.
0.2420.7At4g30330829156small nuclear ribonucleoprotein E, putative / snRNP-E, putative / Sm protein E, putativeF:molecular_function unknown;P:unknown;C:small nucleolar ribonucleoprotein complex, nucleus;MFOAPS.X.H.G.
0.2319.3At1g71260843467ATWHY2 (A. THALIANA WHIRLY 2)Encodes a homolog of the potato p24 protein. It shares the conserved KGKAAL domain, a putative DNA-binding domain, with potato p24 and is localized to mitochondria and not the nucleus.S.X.H.G.
0.1912.7At5g11630831035unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PS.X.H.G.
0.1710.2At5g10390830903histone H3F:DNA binding;P:nucleosome assembly;C:nucleus, chloroplast, nucleosome;MFPOS.X.H.G.
0.157.8At3g2890082252460S ribosomal protein L34 (RPL34C)F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic ribosome, cytosolic large ribosomal subunit, ribosome;MOPFAS.X.H.G.
0.157.8At4g0081082800460S acidic ribosomal protein P1 (RPP1B)F:structural constituent of ribosome;P:translational elongation;C:cytosol, cytosolic ribosome, ribosome, nucleus;MFPOAS.X.H.G.
0.135.8At1g07370837249PCNA1 (PROLIFERATING CELLULAR NUCLEAR ANTIGEN)Encodes putative proliferating cell nuclear antigen involved in cell cycle regulation.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.022e-240At4g00630825834KEA2member of Putative potassium transporter familyC.G.S.X.
0.032e-240At2g28930817442APK1BF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:plasma membrane;MPOBFVAC.G.S.X.
0.032e-136At5g66870836821ASL1Encodes LOB domain protein whose overexpression results in KNOX gene repression. Overexpression also results in plants with hyponastic leaves, downward pointing flowers and reduced apical dominance. May be involved in the transcriptional regulation of the homeobox gene BP (brevipedicellus) during lateral organ differentiation. Acts together with AS2 in proximal-distal symmetry determination.C.G.S.X.
0.021e+034At5g02820831314RHL2 (ROOT HAIRLESS 2)Involved in the patterning and shape of leaf trichomes. Encodes the DNA topoisomerase VI SPO11-3, involved in endoreduplicationC.G.S.X.
0.011e+034At5g46270834669ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein binding / transmembrane receptorF:protein binding, transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMOBFVAC.G.S.X.
0.021e+034At5g06160830503ATO (ATROPOS)Encodes a protein with similarity to pre-mRNA splicing factor SF3a60 that is involved in gametic cell fate determination. Loss of function results in the ectopic expression of egg cell makers suggesting a role in restriction of gametic cell fate. Expressed strongly in gametophytes and weakly in sporophytes.C.G.S.X.
0.011e+034At4g21660828253proline-rich spliceosome-associated (PSP) family proteinF:unknown;P:mRNA processing;C:nucleus, chloroplast;MOFPVBAC.G.S.X.
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Orthologous genes

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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.229e-238Glycine maxGma.16361.1.S1_atBI971888--6e-2At3g46940deoxyuridine 5'-triphosphate nucleotidohydrolase familyC.G.S.X.
0.035e-134Hordeum vulgareContig4183_s_atContig4183--9e-8At4g26870aspartyl-tRNA synthetase, putative / aspartate--tRNA ligase, putativeC.G.S.X.
0.032e+034Oryza sativaOs.27932.1.S1_at---0C.G.S.X.
0.211e-654Populus trichocarpaPtpAffx.216209.1.S1_atpmrna30854--5e-7At3g46940deoxyuridine 5'-triphosphate nucleotidohydrolase familyC.G.S.X.
0.051e+034Triticum aestivumTaAffx.27333.1.S1_atCA678145--4e-1At3g46940deoxyuridine 5'-triphosphate nucleotidohydrolase familyC.G.S.X.
0.092e-1167Vitis vinifera1608862_atCB340807hypothetical protein LOC100242070-8e-11At3g46940deoxyuridine 5'-triphosphate nucleotidohydrolase familyC.G.S.X.
0.034e-134Zea maysZm.2168.1.A1_atBE638518--2e+0At3g46940deoxyuridine 5'-triphosphate nucleotidohydrolase familyC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0009394The chemical reactions and pathways involving a 2'-deoxyribonucleotide, a compound consisting of 2'-deoxyribonucleoside (a base linked to a 2'-deoxyribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety.
LGO:0046080The chemical reactions and pathways involving dUTP, deoxyuridine (5'-)triphosphate.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00122Link to KaPPA-View 4Pyrimidine metabolism

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

00240Link to KEGG PATHWAYPyrimidine metabolism
01100Link to KEGG PATHWAYMetabolic pathways
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