Gene omics information

Query gene ID At3g46530
Gene name RPP13 (RECOGNITION OF PERONOSPORA PARASITICA 13)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7385.5At3g46530823806RPP13 (RECOGNITION OF PERONOSPORA PARASITICA 13)Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.S.X.H.G.
0.6781.6At3g44630823589disease resistance protein RPP1-WsB-like (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:N-terminal protein myristoylation, defense response;C:intrinsic to membrane;PMBOFAVS.X.H.G.
0.6075.7At4g19510827692disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMOBFAS.X.H.G.
0.5065.3At1g69550843291disease resistance protein (TIR-NBS class), putativeF:transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, endomembrane system;PBOMFS.X.H.G.
0.3338.1At1g58807842225disease resistance protein (CC-NBS-LRR class), putative / PRM1 homolog, putativeF:protein binding, ATP binding;P:defense response, apoptosis;C:cellular_component unknown;PMBOFAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
42.399.8E-MEXP-509-raw-cel-829148703
30.099.7E-MEXP-509-raw-cel-829148808
23.199.6E-MEXP-509-raw-cel-829148666
22.799.6E-MEXP-509-raw-cel-829148842
19.099.5E-MEXP-509-raw-cel-829148420
18.499.5GSM131391AtGen_6-7211_UV-Bstress-Shoots-1.0h_Rep1GSE5626AtGenExpress: Stress Treatments (UV-B stress)
16.999.5E-MEXP-509-raw-cel-829148877
16.299.5E-MEXP-509-raw-cel-829148525
15.999.5E-MEXP-509-raw-cel-829148165
15.999.5E-MEXP-509-raw-cel-829148385
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.6401011At3g46730823826disease resistance protein (CC-NBS class), putativeF:ATP binding;P:defense response, apoptosis;C:endomembrane system;PMBOFAC.G.S.X.
0.532e-79297At3g46710823824disease resistance protein (CC-NBS-LRR class), putativeF:ATP binding;P:defense response, apoptosis;C:cellular_component unknown;PMBOFVAC.G.S.X.
0.013e-138At2g28660817415copper-binding family proteinF:copper ion binding, metal ion binding;P:copper ion transport, metal ion transport;C:chloroplast;OPMBFC.G.S.X.
0.011e+036At5g53800835461unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPVAC.G.S.X.
0.011e+036At5g37860833764copper-binding family proteinF:copper ion binding, metal ion binding;P:copper ion transport, metal ion transport;C:cellular_component unknown;POBFMC.G.S.X.
0.011e+036At5g47250834772disease resistance protein (CC-NBS-LRR class), putativeF:protein binding, ATP binding;P:defense response, apoptosis;C:mitochondrion;PMBOFAC.G.S.X.
0.011e+036At4g13300826960TPS13 (TERPENOID SYNTHASE 13)Catalyzes the conversion of farnesyl diphosphate to (Z)-gamma-bisabolene and the additional minor products E-nerolidol and alpha-bisabolol. Expressed in cortex and sub-epidermal layers of roots, leaf hydathodes and flower stigmata. Induced by wounding.C.G.S.X.
0.011e+036At1g73400843675pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFMABC.G.S.X.
0.015e+034At5g23800832445agenet domain-containing proteinF:RNA binding;P:unknown;C:cellular_component unknown;POBMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.014e-138Glycine maxGmaAffx.36836.1.S1_atBI969127hypothetical protein LOC547474-3e+0At4g17718-C.G.S.X.
0.016e-136Hordeum vulgareContig14469_atContig14469--6e-7At3g21250ATMRP6C.G.S.X.
0.012e-140Oryza sativaOs10g05686009638.m03827-Disease resistance protein family protein4e+0At5g42957unknown proteinC.G.S.X.
0.012e+036Populus trichocarpaPtpAffx.213411.1.S1_atpmrna26234hypothetical protein-1e-18At3g52490heat shock protein-relatedC.G.S.X.
0.023e-138Triticum aestivumTaAffx.78951.1.S1_atCA723870--9e-1At5g16760inositol 1,3,4-trisphosphate 5/6-kinaseC.G.S.X.
0.029e-238Vitis vinifera1617892_atCD714637--3e-1At4g12860UNE14 (unfertilized embryo sac 14)C.G.S.X.
0.012e+034Zea maysZm.17677.1.S1_atCK369609--4e-1At1g77220unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009626The rapid, localized death of plant cells in response to invasion by a pathogen.
XGO:0009814A response of a plant to a pathogenic agent that prevents the occurrence or spread of disease.
SGO:0006952Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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