Gene omics information

Query gene ID At3g46280
Gene name protein kinase-related
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g46280823773protein kinase-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMFBOS.X.H.G.
1.00100.0At1g51800841606leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAS.X.H.G.
0.8089.8At4g22470828342protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;MBOPFVAS.X.H.G.
0.7586.9At2g17740816283DC1 domain-containing proteinF:unknown;P:unknown;C:cellular_component unknown;POS.X.H.G.
0.6478.9At2g39200818505MLO12 (MILDEW RESISTANCE LOCUS O 12)A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in root tips and cotyledon vascular system, in floral organs (anthers and stigma), and in fruit abscission zone, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).S.X.H.G.
0.6378.1At1g51850841612leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVAS.X.H.G.
0.6378.1At2g19190816436FRK1 (FLG22-INDUCED RECEPTOR-LIKE KINASE 1)Receptor-like protein kinase. Involved in early defense signaling.S.X.H.G.
0.6176.7At1g51790841605kinaseF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
101.499.9GSM128686Underwood_1-39_E.coli-TUV86-2-fliC-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
93.899.9GSM142853MG001_ATH1_A6-Torres-2N6GSE6176Impact of Type III effectors on plant defense responses
79.399.9GSM142834MG001_ATH1_A12-Torres-5N6GSE6176Impact of Type III effectors on plant defense responses
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.695e-116418At3g46270823772receptor protein kinase-relatedF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MPBOFVAC.G.S.X.
0.573e-74280At3g46260823771protein kinase-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
0.067e-446At3g46240823769protein kinase-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BMOPFVAC.G.S.X.
0.037e-446At1g244856240649-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PBOMFAVC.G.S.X.
0.012e-138At1g66280842945BGLU22F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:response to salt stress;C:membrane;BOPMFAC.G.S.X.
0.017e-136At5g03160831917ATP58IPK (ARABIDOPSIS HOMOLOG OF MAMALLIAN P58IPK)J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast.C.G.S.X.
0.013e+034Atcg00740--RNA polymerase alpha subunitC.G.S.X.
0.023e+034At3g57440824911unknown proteinF:unknown;P:unknown;C:unknown;PC.G.S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e-138Glycine maxGmaAffx.30041.1.S1_atAW185758--8e-1At1g72240unknown proteinC.G.S.X.
0.021e+034Hordeum vulgareHT09D15r_s_atHT09D15r--3e+0At5g46730glycine-rich proteinC.G.S.X.
0.026e+034Oryza sativaOs05g05682009633.m04622-Typical P-type R2R3 Myb protein (Fragment)6e-6At3g01530AtMYB57 (myb domain protein 57)C.G.S.X.
0.024e+034Populus trichocarpaPtpAffx.157025.1.S1_atCK107493--6e-15At5g18930BUD2 (BUSHY AND DWARF 2)C.G.S.X.
0.023e+034Triticum aestivumTa.28432.1.S1_atBQ171475--6e+0At5g20165unknown proteinC.G.S.X.
0.028e-134Vitis vinifera1622819_atBQ798887hypothetical protein LOC100264319-5e-18At4g00110GAE3 (UDP-D-GLUCURONATE 4-EPIMERASE 3)C.G.S.X.
0.025e+032Zea maysZmAffx.146.1.A1_atAI66782630S ribosomal protein S31-2e-1At4g21450vesicle-associated membrane family protein / VAMP family proteinC.G.S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage