CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At3g45870

Gene name integral membrane family protein / nodulin MtN21-related

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.27 26.2 At3g45870 823730 integral membrane family protein / nodulin MtN21-related F:unknown;P:unknown;C:membrane;BPOAMF S.X. H.G.
0.55 70.6 At1g29200 839795 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P S.X. H.G.
0.40 50.8 At5g55950 835693 transporter-related F:unknown;P:N-terminal protein myristoylation;C:membrane;PMFOBA S.X. H.G.
0.09 2.8 At2g41610 818759 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.08 2.3 At5g60720 836193 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POBM S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
268.9 100.0 GSM133762 Lindsey_1-14_torpedo-root_Rep1_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
253.3 100.0 GSM184551 Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
108.8 99.9 GSM131655 ATGE_27_A GSE5633 AtGenExpress: Developmental series (shoots and stems)
96.6 99.9 GSM131656 ATGE_27_B GSE5633 AtGenExpress: Developmental series (shoots and stems)
88.6 99.9 GSM131657 ATGE_27_C GSE5633 AtGenExpress: Developmental series (shoots and stems)
86.2 99.9 GSM205430 met1-3_leaf_fourth-selfed generation_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
81.4 99.9 GSM205432 Col_ leaf_ wildtype_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
79.5 99.9 E-MEXP-1451-raw-cel-1585200362
78.7 99.9 GSM133766 Lindsey_1-18_torpedo-root_Rep3_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
74.1 99.9 GSM205435 Col_ leaf_ wildtype_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.34 8e-25 115 At4g19185 827657 integral membrane family protein F:unknown;P:unknown;C:membrane;BPOAM C.G. S.X.
0.17 7e-16 85 At5g45370 834573 nodulin-related / integral membrane family protein F:unknown;P:unknown;C:membrane;BOPAMF C.G. S.X.
0.01 6e-1 36 At5g45030 834534 catalytic F:catalytic activity;P:biological_process unknown;C:cellular_component unknown;PB C.G. S.X.
0.01 2e+0 34 At5g12100 831083 pentatricopeptide (PPR) repeat-containing protein F:unknown;P:unknown;C:unknown;POMFBA C.G. S.X.
0.01 2e+0 34 At4g32970 829434 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOBF C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.15 2e-7 57 Glycine max GmaAffx.51551.2.S1_x_at BU081474 - - 1e-3 At4g19185 integral membrane family protein C.G. S.X.
0.02 1e+0 34 Hordeum vulgare EBem09_SQ006_J23_at EBem09_SQ006_J23 - - 8e+0 At5g09240 transcriptional coactivator p15 (PC4) family protein C.G. S.X.
0.02 1e+0 36 Oryza sativa Os08g0106100 AK071868.1 - Hypothetical protein 4e-1 At3g45870 integral membrane family protein / nodulin MtN21-related C.G. S.X.
0.35 6e-20 99 Populus trichocarpa PtpAffx.223338.1.S1_at pmrna41280 mtn21-like protein - 4e-20 At3g45870 integral membrane family protein / nodulin MtN21-related C.G. S.X.
0.02 6e-1 36 Triticum aestivum TaAffx.26383.1.S1_at CA689402 - - 2e+1 Atmg01275 - C.G. S.X.
0.21 2e-28 125 Vitis vinifera 1621404_at CB916166 hypothetical protein LOC100263130 - 5e-28 At3g45870 integral membrane family protein / nodulin MtN21-related C.G. S.X.
0.02 4e+0 32 Zea mays Zm.19294.1.A1_at CO519402 hypothetical protein LOC100217152 - 3e-1 At5g33370 GDSL-motif lipase/hydrolase family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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