CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At3g45680

Gene name proton-dependent oligopeptide transport (POT) family protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.44 57.2 At3g45680 823710 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport, response to nematode;C:membrane;PBMOF S.X. H.G.
0.40 50.8 At2g22920 816823 serine carboxypeptidase S10 family protein F:serine-type carboxypeptidase activity;P:proteolysis;C:plant-type cell wall;PMFBO S.X. H.G.
0.40 50.8 At5g37990 833778 S-adenosylmethionine-dependent methyltransferase/ methyltransferase F:S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity;P:biological_process unknown;C:endomembrane system;POBMF S.X. H.G.
0.33 38.1 At5g38030 833782 MATE efflux family protein F:antiporter activity, drug transporter activity, transporter activity;P:response to nematode;C:membrane;BOPFAM S.X. H.G.
0.10 3.4 At1g11450 837687 nodulin MtN21 family protein F:unknown;P:unknown;C:endomembrane system, membrane;PBOAM S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
93.0 99.9 E-MEXP-791-raw-cel-1122937614
87.1 99.9 GSM133762 Lindsey_1-14_torpedo-root_Rep1_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
74.9 99.9 E-MEXP-791-raw-cel-1122937596
70.2 99.9 GSM237281 Root control rep 2 GSE9311 Gene expression in roots and shoots of plants grown on selenate
63.9 99.8 GSM237280 Root control rep 1 GSE9311 Gene expression in roots and shoots of plants grown on selenate
51.7 99.8 E-MEXP-791-raw-cel-1122937578
49.5 99.8 GSM133124 S0_24H_B GSE5688 AtGenExpress: Response to sulfate limitation
47.5 99.8 GSM291023 root - 08% oxygen - 30min - G GSE11558 transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
40.3 99.8 GSM131574 ATGE_99_B GSE5631 AtGenExpress: Developmental series (roots)
39.5 99.8 GSM131573 ATGE_99_A GSE5631 AtGenExpress: Developmental series (roots)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.80 0 747 At3g45690 823711 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:membrane;PBMOF C.G. S.X.
0.68 3e-164 579 At3g45700 823712 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:membrane;PMBOF C.G. S.X.
0.67 2e-155 549 At3g45720 823714 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:membrane;PBMOFA C.G. S.X.
0.69 5e-147 521 At3g45710 823713 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:membrane;PBMOFA C.G. S.X.
0.26 9e-41 169 At3g45650 823707 NAXT1 (NITRATE EXCRETION TRANSPORTER1) Encodes a nitrate efflux transporter NAXT1 (for NITRATE EXCRETION TRANSPORTER1). Localized to the plasma membrane. NAXT1 belongs to a subclass of seven NAXT members from the large NITRATE TRANSPORTER1/PEPTIDE TRANSPORTER family and is mainly expressed in the cortex of mature roots. C.G. S.X.
0.24 3e-34 147 At3g45660 823708 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:membrane;PBMOF C.G. S.X.
0.06 9e-7 56 At3g45673 6240250 unknown protein F:unknown;P:unknown;C:unknown C.G. S.X.
0.01 1e-2 42 At3g22670 821838 pentatricopeptide (PPR) repeat-containing protein F:unknown;P:biological_process unknown;C:mitochondrion;POFMBA C.G. S.X.
0.01 5e-2 40 At3g48200 823977 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BOP C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e-2 42 Glycine max GmaAffx.61130.1.S1_at CA799668 - - 5e-3 At3g45700 proton-dependent oligopeptide transport (POT) family protein C.G. S.X.
0.02 6e+0 32 Hordeum vulgare HVSMEf0001L22r2_at HVSMEf0001L22r2 - - 3e-1 At2g31305 INH3 (INHIBITOR-3) C.G. S.X.
0.01 4e-1 38 Oryza sativa OsAffx.4441.1.S1_at - - - 0 C.G. S.X.
0.02 5e+0 34 Populus trichocarpa PtpAffx.212119.1.S1_at pmrna23767 hypothetical protein - 3e+0 At5g01790 unknown protein C.G. S.X.
0.02 9e-1 36 Triticum aestivum Ta.5485.3.S1_at BJ243380 - - 6e+0 At5g18810 SCL28 C.G. S.X.
0.03 2e-1 36 Vitis vinifera 1619529_at BQ798281 hypothetical protein LOC100241890 - 5e-47 At3g20290 ATEHD1 (EPS15 HOMOLOGY DOMAIN 1) C.G. S.X.
0.02 6e+0 32 Zea mays Zm.9659.1.A1_at BM350799 - - 4e-1 At1g69510 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0009624 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a nematode.
C GO:0006857 The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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