CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At3g45070

Gene name sulfotransferase family protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.40 50.8 At3g45070 823642 sulfotransferase family protein F:sulfotransferase activity;P:biological_process unknown;C:cellular_component unknown;MOPBF S.X. H.G.
0.40 50.8 At1g13420 837902 ST4B (SULFOTRANSFERASE 4B) Encodes a sulfotransferase. Unlike the related ST4A protein (At2g14920), in vitro experiements show that this enzyme does not act brassinosteroids. ST4B is expressed in the roots and transcript levels rise in response to cytokinin treatment. S.X. H.G.
0.40 50.8 At5g19790 832099 RAP2.11 (related to AP2 11) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family (RAP2.11). The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. S.X. H.G.
0.13 5.8 At1g14960 838061 major latex protein-related / MLP-related F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P S.X. H.G.
0.13 5.8 At5g19800 832100 hydroxyproline-rich glycoprotein family protein F:unknown;P:biological_process unknown;C:endomembrane system;MPOFBVA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
224.1 100.0 GSM142751 MJ001_ATH1_A2-jones-WT2 GSE6165 The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
185.6 100.0 GSM142754 MJ001_ATH1_A5-jones-WT-Rep3 GSE6165 The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
182.2 100.0 GSM142750 MJ001_ATH1_A1-jones-WT1 GSE6165 The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
149.3 99.9 E-MEXP-791-raw-cel-1122937578
149.1 99.9 E-MEXP-265-raw-cel-414617783
133.7 99.9 GSM184900 Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 3 GSE7641 Expression analysis of root cell-types after treatment with salt
132.8 99.9 E-MEXP-265-raw-cel-414617695
100.4 99.9 GSM142755 MJ001_ATH1_A6-jones-RH-Rep3 GSE6165 The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
98.6 99.9 E-MEXP-265-raw-cel-414618693
97.0 99.9 E-MEXP-791-raw-cel-1122937614
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Homologous genes

Paralogous genes

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HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.89 0 1287 At3g45080 823643 sulfotransferase family protein F:sulfotransferase activity;P:biological_process unknown;C:cellular_component unknown;MOPBF C.G. S.X.
0.79 6e-99 361 At2g27570 817303 sulfotransferase family protein F:sulfotransferase activity;P:biological_process unknown;C:cellular_component unknown;MPBOF C.G. S.X.
0.32 1e-29 131 At1g13420 837902 ST4B (SULFOTRANSFERASE 4B) Encodes a sulfotransferase. Unlike the related ST4A protein (At2g14920), in vitro experiements show that this enzyme does not act brassinosteroids. ST4B is expressed in the roots and transcript levels rise in response to cytokinin treatment. C.G. S.X.
0.44 2e-18 93 At5g43690 834389 sulfotransferase family protein F:sulfotransferase activity;P:biological_process unknown;C:cellular_component unknown;MPOBF C.G. S.X.
0.35 2e-18 93 At1g28170 839711 sulfotransferase family protein F:sulfotransferase activity;P:biological_process unknown;C:cellular_component unknown;MOPBF C.G. S.X.
0.28 6e-16 85 At1g13430 837903 ST4C (SULFOTRANSFERASE 4C) Encodes a sulfotransferase. Unlike the related ST4A protein (At2g14920), in vitro experiements show that this enzyme does not act brassinosteroids. ST4C is expressed in the roots and transcript levels rise in response to cytokinin treatment. C.G. S.X.
0.40 1e-13 77 At4g26280 828734 sulfotransferase family protein F:sulfotransferase activity;P:biological_process unknown;C:cellular_component unknown;MPOBF C.G. S.X.
0.25 3e-11 69 At2g14920 815981 ST4A (SULFOTRANSFERASE 4A) Encodes a brassinosteroid sulfotransferase that may be involved in brassinosteroid inactivation. In vitro experiements show that this enzyme can act on a broad group of naturally occurring brassinosteroids, including the 24-epimers and (22R,23R)-28 homobrassinosteroids, that have an array of different side chains, though it shows a preference for (22R,23R)-28 homobrassinosteroids. ST4A is expressed in the roots and transcript levels fall in response to cytokinin treatment. C.G. S.X.
0.10 8e-6 52 At2g03750 814902 sulfotransferase family protein F:sulfotransferase activity;P:biological_process unknown;C:endomembrane system;MPOBF C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e+0 34 Glycine max HgAffx.11254.1.S1_at CB935196 - - 3e-1 At3g51040 RTH (RTE1-HOMOLOG) C.G. S.X.
0.02 9e-1 34 Hordeum vulgare Contig26292_at Contig26292 - - 5e+0 At2g42000 plant EC metallothionein-like family 15 protein C.G. S.X.
0.03 4e-3 44 Oryza sativa Os08g0515100 NM_188989.1 - Sulfotransferase family protein 2e-3 At3g45080 sulfotransferase family protein C.G. S.X.
0.03 2e-1 38 Populus trichocarpa PtpAffx.66306.1.S1_at BU875191 hypothetical protein - 6e-2 At2g27570 sulfotransferase family protein C.G. S.X.
0.03 3e-2 40 Triticum aestivum TaAffx.57408.1.S1_s_at CA630676 - - 2e-2 At3g45070 sulfotransferase family protein C.G. S.X.
0.03 6e-1 34 Vitis vinifera 1610589_at CB979189 hypothetical protein LOC100248961 - 4e-23 At4g38040 exostosin family protein C.G. S.X.
0.03 1e+1 30 Zea mays ZmAffx.501.1.S1_at AI691747 - - 8e-1 At5g62100 ATBAG2 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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