CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At3g44970

Gene name cytochrome P450 family protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At3g44970 823632 cytochrome P450 family protein F:electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding;P:unknown;C:endomembrane system;MPBFOAV S.X. H.G.
0.33 38.1 At1g52100 841640 jacalin lectin family protein F:molecular_function unknown;P:biological_process unknown;C:membrane;PFO S.X. H.G.
0.01 0.2 At3g43600 823457 AAO2 (ALDEHYDE OXIDASE 2) Encodes aldehyde oxidase AAO2. S.X. H.G.
0.00 0.0 At5g60120 836134 TOE2 F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;POBV S.X. H.G.
0.00 0.0 At4g37800 829936 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative F:hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process, cellular glucan metabolic process;C:endomembrane system, cell wall, apoplast;PFBO S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
227.5 100.0 GSM317519 Apex_5DAS_1 GSE12676 Arabidopsis thaliana Ler developmental series
144.8 99.9 GSM131643 ATGE_2_A GSE5633 AtGenExpress: Developmental series (shoots and stems)
116.1 99.9 GSM131645 ATGE_2_C GSE5633 AtGenExpress: Developmental series (shoots and stems)
104.8 99.9 GSM131644 ATGE_2_B GSE5633 AtGenExpress: Developmental series (shoots and stems)
72.7 99.9 GSM109124 vte2-1(Col-0) 3 day, biological rep3 GSE4847 Expression data from tocopherol deficient seedlings of Arabidopsis
71.6 99.9 Cornah_1-15_msc_Rep3_ATH1
71.2 99.9 Cornah_1-14_msc_Rep2_ATH1
61.9 99.8 GSM177127 gid1a-1 gid1b-1 gid1c-2 mock treated for 1 hr, replicate 3 GSE7353 Early GA response genes in Arabidopsis thaliana
53.0 99.8 GSM143309 Tsu_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
52.7 99.8 GSM143310 Tsu_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes

Paralogous genes

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HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.33 2e-47 190 At5g48000 834851 CYP708A2 Encodes a member of the CYP708A family of cytochrome P450 enzymes. THAH appears to add a hydroxyl group to the triterpene thalianol. thah1 mutants have an elevated accumulation of thalianol. thah1-1 mutants have longer roots than wild type plants. Thalian-diol and desaturated thalian-diol are lost from the root extracts of thah1-1 mutants. Overexpression of the sequence from At5g48000.1 rescues the thah1-1 mutant phenotype (Field 2008); it is unknown whether the shorter sequences associated with other gene models would provide functional complementation. C.G. S.X.
0.29 3e-46 186 At1g78490 844185 CYP708A3 member of CYP708A C.G. S.X.
0.16 1e-24 115 At1g55940 842045 CYP708A1 member of CYP708A C.G. S.X.
0.03 2e-4 48 At3g30290 822729 CYP702A8 a member of cytochrome P450 gene family C.G. S.X.
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Orthologous genes

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HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e+0 36 Glycine max GmaAffx.73585.2.S1_at BM177558 - - 6e-17 At3g51790 ATG1 (ARABIDOPSIS TRANSMEMBRANE PROTEIN G1P-RELATED 1) C.G. S.X.
0.02 5e+0 32 Hordeum vulgare HA09n12r_at HA09n12r - - 2e-1 At3g43850 unknown protein C.G. S.X.
0.02 4e-1 38 Oryza sativa OsAffx.12132.1.S1_at - - - 0 C.G. S.X.
0.03 2e-2 42 Populus trichocarpa PtpAffx.417.2.S1_at AI166562 cytochrome P450 - 2e-3 At1g65670 CYP702A1 C.G. S.X.
0.02 3e+0 34 Triticum aestivum TaAffx.83851.1.S1_at CA649572 - - 5e-1 At3g13227 serine-rich protein-related C.G. S.X.
0.02 8e-1 34 Vitis vinifera 1619034_at CK136955.1 hypothetical protein LOC100264301 - 1e-3 At4g15393 CYP702A5 C.G. S.X.
0.02 8e-2 38 Zea mays Zm.4372.1.A1_at CF626676 hypothetical protein LOC100273480 - 2e+0 At3g15690 biotin carboxyl carrier protein of acetyl-CoA carboxylase-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00347 Cytochrome P450

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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