Gene omics information

Query gene ID At3g44880
Gene name ACD1 (ACCELERATED CELL DEATH 1)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2930.3At3g44880823622ACD1 (ACCELERATED CELL DEATH 1)Encodes a pheide a oxygenase (PAO). Accelerated cell death (acd1) mutants show rapid, spreading necrotic responses to both virulent and avirulent Pseudomonas syringae pv. maculicola or pv. tomato pathogens and to ethylene.S.X.H.G.
0.4457.2At1g22370838844AtUGT85A5 (UDP-glucosyl transferase 85A5)F:transferase activity, transferring glycosyl groups, glucuronosyltransferase activity;P:metabolic process;C:unknown;PMVBOFS.X.H.G.
0.4355.3At4g19390827680-F:molecular_function unknown;P:biological_process unknown;C:chloroplast;BOPAS.X.H.G.
0.3846.7At2g25625817103unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PS.X.H.G.
0.2930.3At3g03470821250CYP89A9member of CYP89AS.X.H.G.
0.2522.6At1g30500839929NF-YA7 (NUCLEAR FACTOR Y, SUBUNIT A7)F:transcription factor activity, specific transcriptional repressor activity;P:negative regulation of gene-specific transcription, regulation of transcription, DNA-dependent;C:CCAAT-binding factor complex, nucleus;PMFOS.X.H.G.
0.2217.5At3g26290822232CYP71B26putative cytochrome P450S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
110.399.9GSM269813WT leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
105.199.9GSM269821WT leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
98.599.9GSM269827C2 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
92.799.9GSM131303AtGen_6-2611_Osmoticstress-Shoots-24.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
90.199.9GSM269819C2 leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
85.499.9GSM269825T8 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
73.699.9GSM269823T6 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
70.699.9GSM269829WT leaf-drought-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
65.399.8GSM131304AtGen_6-2612_Osmoticstress-Shoots-24.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
62.499.8GSM269817T8 leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.025e-240At2g29900817540presenilin family proteinF:molecular_function unknown;P:intracellular signaling cascade;C:integral to membrane, membrane;MOPAC.G.S.X.
0.022e-138Atmg01010--hypothetical proteinC.G.S.X.
0.022e-138Atmg01000--hypothetical proteinC.G.S.X.
0.022e-138At2g07674815346unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PVMOBC.G.S.X.
0.012e-138At2g45690819177SSE1 (SHRUNKEN SEED 1)Encodes a protein with similarity to yeast Pep16p, a membrane localized protein involved in peroxisome assembly and protein-trafficking. SSE1 mutant seeds do not accumulate oils and dessicated seeds have a shrunken appearance. Involved in protein and oil body biogenesis. SSE is expressed during seed development, reaching the highest peak in mature siliques. Expression in leaves and roots is low compared to cotyledons and flowers. Located in peroxisomes and endoplasmic reticulum. Homologous to the peroxin PEX16 and complements the pex16 mutants of the yeast Yarrowia lipolytica.C.G.S.X.
0.018e-136Atcg01280--hypothetical proteinC.G.S.X.
0.018e-136Atcg00860--Encodes an unknown protein. This gene is regulated by AtSIG6 transcriptionally.C.G.S.X.
0.018e-136At5g381208337924-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinF:4-coumarate-CoA ligase activity;P:metabolic process;C:unknown;BOFMPAVC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.306e-21103Glycine maxGmaAffx.84367.1.S1_atBQ298083lethal leaf spot 1-like protein-4e-21At3g44880ACD1 (ACCELERATED CELL DEATH 1)C.G.S.X.
0.212e-1583Hordeum vulgareContig7359_atContig7359--3e-15At3g44880ACD1 (ACCELERATED CELL DEATH 1)C.G.S.X.
0.163e-1481Oryza sativaOs03g0146400AK111974.1-Lethal leaf-spot 1 (Fragment)2e-14At3g44880ACD1 (ACCELERATED CELL DEATH 1)C.G.S.X.
0.254e-34147Populus trichocarpaPtpAffx.138005.1.S1_atBP936199--3e-34At3g44880ACD1 (ACCELERATED CELL DEATH 1)C.G.S.X.
0.134e-1273Triticum aestivumTa.2728.1.S1_atCD881214--5e-12At3g44880ACD1 (ACCELERATED CELL DEATH 1)C.G.S.X.
0.122e-1789Vitis vinifera1616605_atBQ794516hypothetical protein LOC100256831-4e-17At3g44880ACD1 (ACCELERATED CELL DEATH 1)C.G.S.X.
0.197e-24111Zea maysZm.13275.1.S1_atCO520423lethal leaf spot1-2e-23At3g44880ACD1 (ACCELERATED CELL DEATH 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009908The process whose specific outcome is the progression of the flower over time, from its formation to the mature structure. The flower is the reproductive structure in a plant, and its development begins with the transition of the vegetative or inflorescence meristem into a floral meristem.
XGO:0010154The process whose specific outcome is the progression of the fruit over time, from its formation to the mature structure. The fruit is a reproductive body of a seed plant.
XGO:0015996The chemical reactions and pathways resulting in the breakdown of chlorophyll, any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment, into less complex products.
XGO:0008219The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death.
XGO:0009816A response of an organism to a bacterium that prevents the occurrence or spread of disease.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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