Gene omics information

Query gene ID At3g44860
Gene name FAMT (farnesoic acid carboxyl-O-methyltransferase)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2319.3At3g44860823620FAMT (farnesoic acid carboxyl-O-methyltransferase)Encodes a farnesoic acid carboxyl-O-methyltransferase.S.X.H.G.
0.4050.8At1g61610842457S-locus lectin protein kinase family proteinF:in 6 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVAS.X.H.G.
0.3133.8At2g38240818403oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity;P:response to salt stress;C:unknown;POBFMS.X.H.G.
0.2522.6At1g17420838314LOX3LipoxygenaseS.X.H.G.
0.2217.5At5g13220831162JAZ10 (JASMONATE-ZIM-DOMAIN PROTEIN 10)Plants overexpressing At5g13220.3, but not At5g13220.1 showed enhanced insensitivity to MeJa.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
60.199.8GSM128720Pieterse_1-6_avrPstDC3000-24h_Rep1_ATH1GSE5525Transcriptome changes of Arabidopsis during pathogen and insect attack
59.799.8GSM131322AtGen_6-3422_Saltstress-Roots-6.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)
54.299.8E-MEXP-807-raw-cel-1173273252
52.699.8GSM157375Truman_1-3_Pst-DC3000(avrRpm1)-4hpi_Rep1_ATH1GSE6831Systemic response to avirulent bacterial infection
50.199.8GSM131321AtGen_6-3421_Saltstress-Roots-6.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
47.799.8GSM157361Ulker_2-4_WRKY-KO-30-Pst-DC3000_Rep1_ATH1GSE6829Group II-A WRKY transcription factors and early leaf senescence
46.999.8GSM131120AtGen_B-6_1-6-1_REP_1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
42.199.8GSM131318AtGen_6-3322_Saltstress-Roots-3.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)
40.699.8E-MEXP-807-raw-cel-1173273116
40.499.8E-MEXP-807-raw-cel-1173273060
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.8901415At3g44870823621S-adenosyl-L-methionine:carboxyl methyltransferase family proteinF:S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity;P:biological_process unknown;C:cellular_component unknown;POBMFC.G.S.X.
0.794e-162571At3g44840823618S-adenosyl-L-methionine:carboxyl methyltransferase family proteinF:S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity;P:biological_process unknown;C:cellular_component unknown;POBMFC.G.S.X.
0.043e-550At5g37990833778S-adenosylmethionine-dependent methyltransferase/ methyltransferaseF:S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity;P:biological_process unknown;C:endomembrane system;POBMFC.G.S.X.
0.021e-448At5g38100833790methyltransferase-relatedF:methyltransferase activity;P:biological_process unknown;C:cellular_component unknown;POBMFC.G.S.X.
0.085e-446At1g66690842987S-adenosyl-L-methionine:carboxyl methyltransferase family proteinF:S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity;P:biological_process unknown;C:cellular_component unknown;POBMFC.G.S.X.
0.128e-342At1g66700842988PXMT1A member of the Arabidopsis SABATH methyltransferase gene family. Encodes PXMT1, a methyltransferase that methylates 1,7-paraxanthine.C.G.S.X.
0.061e-138At5g37970833776S-adenosyl-L-methionine:carboxyl methyltransferase family proteinF:S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity;P:biological_process unknown;C:unknown;POBMFC.G.S.X.
0.011e-138At1g61370842431S-locus lectin protein kinase family proteinF:in 7 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e-240Glycine maxGmaAffx.47649.1.S1_atCD407147salicylic acid methyl transferase-like protein-2e-4At4g36470S-adenosyl-L-methionine:carboxyl methyltransferase family proteinC.G.S.X.
0.031e+034Hordeum vulgareHVSMEa0005L24r2_x_atHVSMEa0005L24r2--5e-1At3g27590unknown proteinC.G.S.X.
0.011e+036Oryza sativaOs.55035.1.S1_at---0C.G.S.X.
0.072e-448Populus trichocarpaPtpAffx.202596.1.S1_s_atpmrna5196hypothetical protein-2e-1At1g66700PXMT1C.G.S.X.
0.032e+034Triticum aestivumTaAffx.120104.1.S1_atBJ244047--1e+0At5g39300ATEXPA25 (ARABIDOPSIS THALIANA EXPANSIN A25)C.G.S.X.
0.032e-136Vitis vinifera1617046_atCF512505hypothetical protein LOC100244517-2e-1At1g68160unknown proteinC.G.S.X.
0.034e+032Zea maysZm.15678.3.A1_x_atBM073330hypothetical protein LOC100193991 /// hypothetical protein LOC100273150 /// hypothetical protein LOC100277471-3e+0At5g16640pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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