Gene omics information

Query gene ID At3g44735
Gene name PSK1
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g44735823603PSK1Phytosulfokine 3 precursor, coding for a unique plant peptide growth factor.S.X.H.G.
0.5570.6At4g24370828539unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMS.X.H.G.
0.5267.4At2g19460816465unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5065.3At1g28250839719unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.4963.5At5g57815835891cytochrome c oxidase subunit 6b, putativeF:cytochrome-c oxidase activity;P:unknown;C:mitochondrion;MPFOS.X.H.G.
0.4862.5At2g32090817769lactoylglutathione lyase family protein / glyoxalase I family proteinF:lactoylglutathione lyase activity;P:carbohydrate metabolic process;C:cellular_component unknown;BPOFMAS.X.H.G.
0.4862.5At4g01897828216unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OBPS.X.H.G.
0.4457.2At3g23805821963RALFL24 (ralf-like 24)Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.S.X.H.G.
0.4355.3At5g25760832645PEX4 (PEROXIN4)mutant displays sucrose-dependent seedling development and reduced lateral root production. PEX4 interacts with PEX22 in a yeast two-hybrid. Necessary for peroxisome biogenesis. The PEX4 and PEX22 pair may be important during the remodeling of peroxisome matrix contents as glyoxysomes transition to leaf peroxisomes.S.X.H.G.
0.4152.4At5g10810830948ATERenhancer of rudimentary homolog ATERS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
50.699.8GSM244452Arabidopsis AtMYB30-ox_90-105 min_ Xanthomonas inoculated_biological rep2_exp2GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
46.799.8GSM142840MG001_ATH1_A1-Torres-1N1GSE6176Impact of Type III effectors on plant defense responses
40.399.8GSM142851MG001_ATH1_A4-Torres-2N1GSE6176Impact of Type III effectors on plant defense responses
36.499.7GSM173447oxt6 mutant, biological rep3GSE7211A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
36.199.7GSM173444wild-type Arabidopsis, biological rep3GSE7211A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
32.999.7GSM173442wild-type Arabidopsis, biological rep1GSE7211A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
32.099.7GSM244457Arabidopsis wild-type_90-105 min_ Xanthomonas inoculated_biological rep2_exp4GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
31.699.7GSM47036hen1 26GSE2473Small RNA biogenesis mutants
31.699.7GSM67086Arabidopsis_Stigma02GSE3056Arabidopsis Pollination Study
31.299.7GSM47034hen1 24GSE2473Small RNA biogenesis mutants
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.031e-136At5g18940832012Mo25 family proteinF:binding;P:biological_process unknown;C:cellular_component unknown;MFPOC.G.S.X.
0.025e-134At5g08730830774IBR domain-containing proteinF:protein binding, zinc ion binding, nucleic acid binding;P:biological_process unknown;C:intracellular;MOPFC.G.S.X.
0.035e-134At5g45960834636GDSL-motif lipase/hydrolase family proteinF:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMC.G.S.X.
0.095e-134At4g186926240656unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.035e-134At4g02970828121AT7SL-1 (Arabidopsis 7SL RNA 1)Signal recognition particle. Type 4 of RNA polymerase III dependent genes.C.G.S.X.
0.035e-134At4g30980829223basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFOC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.213e-342Glycine maxGma.12836.1.A1_atCD392001--3e-3At3g44735PSK1C.G.S.X.
0.054e+030Hordeum vulgareHV14N20u_x_atHV14N20u--1e-8At3g54890LHCA1C.G.S.X.
0.032e-136Oryza sativaOsAffx.17687.1.S1_at---0C.G.S.X.
0.043e+032Populus trichocarpaPtpAffx.82343.1.A1_atCV250656hypothetical protein-3e-19At4g2939040S ribosomal protein S30 (RPS30B)C.G.S.X.
0.062e+032Triticum aestivumTaAffx.105328.1.S1_atCA736077--2e+0At3g44735PSK1C.G.S.X.
0.079e-338Vitis vinifera1607170_s_atCB917184--5e-2At3g44735PSK1C.G.S.X.
0.023e+030Zea maysZm.7309.1.S1_s_atAF384036.1nucleosome/chromatin assembly factor A /// nucleosome/chromatin assembly factor A-2e-3At1g18800NRP2 (NAP1-RELATED PROTEIN 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0008283The multiplication or reproduction of cells, resulting in the expansion of a cell population.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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