Gene omics information

Query gene ID At3g43720
Gene name protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7586.9At3g43720823481protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:anchored to membrane, membrane;PS.X.H.G.
0.9195.6At3g61550825328zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVS.X.H.G.
0.7788.0At2g26910817232PDR4 (PLEIOTROPIC DRUG RESISTANCE 4)F:ATPase activity, coupled to transmembrane movement of substances;P:multidrug transport;C:membrane;BOMFAPVS.X.H.G.
0.7788.0At4g36250829782ALDH3F1 (Aldehyde Dehydrogenase 3F1)Encodes a putative aldehyde dehydrogenase. The gene is not responsive to osmotic stress and is expressed constitutively at a low level in plantlets and root cultures.S.X.H.G.
0.7184.2At1g17840838363WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11)Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix.S.X.H.G.
0.6781.6At3g20820821630leucine-rich repeat family proteinF:protein binding;P:signal transduction, defense response;C:apoplast, cell wall, chloroplast, membrane;PMOBFAS.X.H.G.
0.6075.7At2g26250817165KCS10 (3-KETOACYL-COA SYNTHASE 10)epidermis-specific, encodes KCS10, a putative 3-ketoacyl-CoA synthase. probably involved in the synthesis of long-chain lipids found in the cuticle.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.399.3GSM134519Col-0_4day_red illumination_+lincomycin_rep1GSE5759red illumination w/o lincomycin
11.899.3GSM131588ATGE_35_AGSE5632AtGenExpress: Developmental series (flowers and pollen)
11.699.3GSM131191AtGen_D-24_2-WL_REP2_ATH1GSE5617AtGenExpress: Light treatments
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.043e-136At3g48180823973unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.021e+034At5g61820836304-F:molecular_function unknown;P:biological_process unknown;C:vacuole;POC.G.S.X.
0.021e+034At3g50120824174unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
0.021e+034At2g36800818252DOGT1 (DON-GLUCOSYLTRANSFERASE 1)Encodes a DON-Glucosyltransferase. The UGT73C5 glucosylates both brassinolide and castasterone in the 23-O position. The enzyme is presumably involved in the homeostasis of those steroid hormones hence regulating BR activity. Transgenic plants overexpressing UGT73C5 show a typical BR-deficient phenotype.C.G.S.X.
0.021e+034At2g36790818251UGT73C6 (UDP-glucosyl transferase 73C6)The At2g36790 gene encodes a UDP-glucose:flavonol-3-O-glycoside-7-O-glucosyltransferase (UGT73C6)attaching a glucosyl residue to the 7-O-position of the flavonols kaempferol, quercetin and their 3-O-glycoside derivatives.C.G.S.X.
0.021e+034At2g36760818248UGT73C2 (UDP-glucosyl transferase 73C2)F:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:endomembrane system;PMVBOFC.G.S.X.
0.021e+034At2g20120816531COV1 (CONTINUOUS VASCULAR RING)Encodes an integral membrane protein of unknown function, highly conserved between plants and bacteria; is likely to be involved in a mechanism that negatively regulates the differentiation of vascular tissue in the stem. Mutants display a dramatic increase in vascular tissue development in the stem in place of the interfascicular region that normally separates the vascular bundles.C.G.S.X.
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Orthologous genes

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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e+034Glycine maxGmaAffx.11558.1.S1_atAW100524--5e-1At3g43720protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.032e+032Hordeum vulgareHM11F16r_atHM11F16r--1e+0At5g18180Gar1 RNA-binding region family proteinC.G.S.X.
0.046e-136Oryza sativaOs06g04741009634.m02663--4e-2At3g48180unknown proteinC.G.S.X.
0.031e-138Populus trichocarpaPtpAffx.210140.1.S1_atpmrna19981hypothetical protein-1e-68At5g44560VPS2.2C.G.S.X.
0.031e+034Triticum aestivumTaAffx.83407.1.S1_atCA657928--1e+0At3g48180unknown proteinC.G.S.X.
0.042e-548Vitis vinifera1619823_atCB969271hypothetical protein LOC100261518-1e-4At3g43720protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.032e+032Zea maysZm.4763.1.S1_atAI739878--4e+0At4g39880ribosomal protein L23 family proteinC.G.S.X.
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Biological processes

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ECCGO IDProcess Name
CGO:0006869The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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