CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At3g43150

Gene name unknown protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At3g43150 823381 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.87 93.5 At1g44990 841064 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system S.X. H.G.
0.79 89.1 At5g36840 833651 transposable element gene F:unknown;P:unknown;C:unknown S.X. H.G.
0.75 86.9 At3g50320 824194 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.73 85.5 At4g08890 3769919 transposable element gene F:unknown;P:unknown;C:unknown S.X. H.G.
0.71 84.2 At2g14410 3768296 - F:unknown;P:unknown;C:unknown S.X. H.G.
0.70 83.5 At5g27190 3770742 transposable element gene F:unknown;P:unknown;C:unknown S.X. H.G.
0.70 83.5 At5g27160 832774 transposable element gene F:unknown;P:unknown;C:unknown S.X. H.G.
0.69 82.9 At1g35614 840459 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.69 82.9 At5g35290 833483 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
679.1 100.0 GSM205432 Col_ leaf_ wildtype_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
419.2 100.0 GSM143300 Ts_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
376.3 100.0 GSM143299 High_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
307.0 100.0 GSM205435 Col_ leaf_ wildtype_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
283.0 100.0 GSM143302 Ts_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
280.8 100.0 GSM253652 Ler 2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
262.9 100.0 GSM253648 Col-0-1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
257.2 100.0 GSM143310 Tsu_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
237.4 100.0 GSM253645 High_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
230.1 100.0 GSM253647 Col-0 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.68 7e-70 264 At3g32160 822980 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.25 6e-64 244 At2g11010 815568 - F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;MPOBFA C.G. S.X.
0.57 2e-39 163 At3g32180 822985 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.49 3e-32 139 At5g35603 833528 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.41 3e-13 75 At3g30220 822722 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.19 1e-9 63 At5g33898 833349 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM C.G. S.X.
0.13 5e-6 52 At4g07932 826285 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P C.G. S.X.
0.01 7e-2 38 At2g34357 2745580 binding F:binding;P:biological_process unknown;C:cellular_component unknown;MOFBPV C.G. S.X.
0.08 3e-1 36 At4g07740 826252 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 1e-1 38 Glycine max GmaAffx.76366.1.S1_s_at BE583484 - - 3e+0 At3g47710 bHLH family protein C.G. S.X.
0.04 6e-1 34 Hordeum vulgare HU08I01u_at HU08I01u - - 6e-1 At3g43150 unknown protein C.G. S.X.
0.04 6e-1 36 Oryza sativa OsAffx.2581.1.S1_at - - - 0 C.G. S.X.
0.04 4e-1 36 Populus trichocarpa PtpAffx.203790.1.S1_s_at pmrna7484 hypothetical protein - 2e-1 At3g43150 unknown protein C.G. S.X.
0.04 7e-2 38 Triticum aestivum TaAffx.66602.1.S1_at BG909137 - - 3e+0 At3g63160 unknown protein C.G. S.X.
0.03 1e+0 32 Vitis vinifera 1617029_at CF513566 - - 4e+0 At3g43150 unknown protein C.G. S.X.
0.04 5e-1 34 Zea mays Zm.15540.1.S1_at CD219351 hypothetical protein LOC100277347 - 1e-2 At1g27390 TOM20-2 (TRANSLOCASE OUTER MEMBRANE 20-2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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