Gene omics information

Query gene ID At3g32130
Gene name -
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8994.6At3g32130822976-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.5974.7At2g29770817527kelch repeat-containing F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMBVOAS.X.H.G.
0.5974.7At5g03400831849unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPS.X.H.G.
0.5773.8At1g401053767152transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.5673.0At1g301503766846transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.5570.6At1g42250840829transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.5570.6At1g433003767304transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.5469.5At4g08430826402Ulp1 protease family proteinF:cysteine-type peptidase activity;P:proteolysis;C:cellular_component unknown;OMPBFAVS.X.H.G.
0.5368.6At1g303903766850transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.5368.6At1g43660840950transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
717.0100.0GSM205364met1-3_leaf_second-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
709.6100.0GSM205426met1-3_leaf_second-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
530.6100.0GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
485.7100.0GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
400.3100.0GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
389.2100.0GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
382.0100.0GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
192.5100.0GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
172.3100.0GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
169.2100.0GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.023e-136At2g22420816773peroxidase 17 (PER17) (P17)F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBC.G.S.X.
0.011e+034At5g02310830916PRT6 (PROTEOLYSIS 6)Encodes PROTEOLYSIS6 (PRT6), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Another component of the N-end rule pathway is arginyl-tRNA:protein arginyltransferase (ATE). Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination.C.G.S.X.
0.011e+034At4g38440830001-F:unknown;P:unknown;C:chloroplast;MFPOBC.G.S.X.
0.011e+034At3g20520821598SVL3 (SHV3-LIKE 3)F:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:anchored to membrane;BPOMC.G.S.X.
0.071e+034At2g04420814982nucleic acid bindingF:nucleic acid binding;P:biological_process unknown;C:mitochondrion;PBOC.G.S.X.
0.061e+034At1g27220839611paired amphipathic helix repeat-containing proteinF:nucleic acid binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMFOBC.G.S.X.
0.025e+032At5g20540832176ATBRXL4 (BREVIS RADIX-LIKE 4)Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity.C.G.S.X.
0.025e+032At5g15940831451binding / catalytic/ oxidoreductaseF:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPAC.G.S.X.
0.015e+032At5g47800834831phototropic-responsive NPH3 family proteinF:protein binding, signal transducer activity;P:response to light stimulus;C:unknown;PC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.037e+032Glycine maxHgAffx.22001.1.S1_atBI451572--1e+0At2g11623unknown proteinC.G.S.X.
0.036e-134Hordeum vulgareContig24285_atContig24285--1e+0At4g18501unknown proteinC.G.S.X.
0.026e-136Oryza sativaOs11g06645009639.m04108-Hypothetical protein3e+0At5g42235Expressed proteinC.G.S.X.
0.032e+034Populus trichocarpaPtpAffx.114.1.S1_atCV267620hypothetical protein-4e+0At5g24105AGP41 (ARABINOGALACTAN-PROTEIN 41)C.G.S.X.
0.031e+034Triticum aestivumTaAffx.50670.1.S1_atCA737107--7e-1At5g37840-C.G.S.X.
0.032e+032Vitis vinifera1621802_atCA813116hypothetical protein LOC100257071-5e-12At5g60600HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)C.G.S.X.
0.038e+030Zea maysZmAffx.1025.1.A1_atAI770423--8e-1At2g25312-C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage