Gene omics information

Query gene ID At3g30280
Gene name transferase family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g30280822728transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFOS.X.H.G.
0.9496.7At1g14580838020zinc finger (C2H2 type) family proteinF:transcription factor activity, zinc ion binding, nucleic acid binding;P:unknown;C:intracellular;MOPFBS.X.H.G.
0.9496.7At4g27550828864ATTPS4Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active but no trehalose phosphatase (TPP)-like domain.S.X.H.G.
0.9496.7At1g27040839593nitrate transporter, putativeF:transporter activity;P:oligopeptide transport;C:membrane;BPMOFS.X.H.G.
0.9396.4At5g36680833633unknown proteinF:unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.9396.4At5g38960833888germin-like protein, putativeF:manganese ion binding, nutrient reservoir activity;P:biological_process unknown;C:endomembrane system, apoplast;PFOBS.X.H.G.
0.9195.6At1g19320838514pathogenesis-related thaumatin family proteinF:molecular_function unknown;P:response to other organism;C:endomembrane system;PMFBOVS.X.H.G.
0.9195.6At2g21420816681zinc finger protein-relatedF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;BOMFPVAS.X.H.G.
0.8994.6At1g36340840541UBC31 (ubiquitin-conjugating enzyme 31)F:ubiquitin-protein ligase activity, small conjugating protein ligase activity;P:regulation of protein metabolic process, post-translational protein modification;C:vacuole;MFOPVS.X.H.G.
0.8994.6At2g24950817034unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PBS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
1632.5100.0GSM311291Laser capture microdissected (LCM) chalazal endosperm at the linear-cotyledon stage, biological replicate 1GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
1311.8100.0GSM311292Laser capture microdissected (LCM) chalazal endosperm at the linear-cotyledon stage, biological replicate 2GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
134.499.9GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
125.199.9GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
111.199.9GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
106.599.9GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
105.899.9GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
100.699.9GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
99.799.9GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
96.799.9GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.654e-104379At4g15390827205transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFOC.G.S.X.
0.361e-23111At5g47950834846transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFOC.G.S.X.
0.047e-446At1g24420839058transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFC.G.S.X.
0.023e-344At1g20795838670F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.014e-240At5g47980834849transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity, acyltransferase activity;P:unknown;C:cellular_component unknown;PFBC.G.S.X.
0.017e-136At5g24550832526BGLU32 (BETA GLUCOSIDASE 32)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:response to other organism;C:endomembrane system;BOPMFAC.G.S.X.
0.017e-136At5g49950835059embryogenesis-associated protein-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BOMFPC.G.S.X.
0.017e-136At1g31440840034SH3 domain-containing protein 1 (SH3P1)F:clathrin binding;P:unknown;C:endomembrane system, plasma membrane;MOBPFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.029e-136Glycine maxGmaAffx.57610.1.S1_atAW509403--1e-2At5g12320ankyrin repeat family proteinC.G.S.X.
0.023e-136Hordeum vulgareContig16595_atContig16595--2e+0At3g08010ATAB2C.G.S.X.
0.023e-138Oryza sativaOs.48950.1.A1_at---0C.G.S.X.
0.029e-136Populus trichocarpaPtpAffx.76374.1.S1_atCV233375hypothetical protein-2e+0At1g20300pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
0.021e+132Triticum aestivumTaAffx.85294.1.S1_x_atCA623948--4e-5At2g40300ATFER4 (ferritin 4)C.G.S.X.
0.023e+032Vitis vinifera1619693_atCF204272.1--8e-4At4g00430PIP1C.G.S.X.
0.025e+032Zea maysZm.15065.1.A1_atBM332475hypothetical protein LOC100279235-3e+0At4g05530IBR1 (INDOLE-3-BUTYRIC ACID RESPONSE 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00355Link to KaPPA-View 4Acyltransferase



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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