Gene omics information

Query gene ID At3g30180
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g30180822709BR6OX2 (BRASSINOSTEROID-6-OXIDASE 2)Encodes a cytochrome p450 enzyme that catalyzes the last reaction in the production of brassinolide. It is capable of converting 6-deoxocastasterone into castasterone, a C-6 oxidation, as well as the further conversion of castasterone into brassinolide by a Baeyer-Villinger oxidation reaction at C-6, resulting in the formation of an unusual seven-membered lactone ring. The enzyme possesses high affinity for both C28- and C27-Brassinosteroids. The expression of the gene using a CYP85A2 promoter:LUC fusion construct was shown to be under circadian and light control.S.X.H.G.
0.3338.1At1g61900842486unknown proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to plasma membrane, plasma membrane, anchored to membrane;PS.X.H.G.
0.2726.2At3g57800825530basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFBS.X.H.G.
0.2217.5At2g20230816542-F:unknown;P:unknown;C:plasma membrane, vacuole;POS.X.H.G.
0.1710.2At3g57790824949glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinF:polygalacturonase activity;P:carbohydrate metabolic process;C:plasma membrane;PBFOMAVS.X.H.G.
0.135.8At1g32410840134vacuolar protein sorting 55 family protein / VPS55 family proteinF:transporter activity;P:transport;C:vacuole;MFPOS.X.H.G.
0.103.4At5g55910835689D6PK (D6 PROTEIN KINASE)D6PK is a protein kinase involved that plays a role in polar auxin transport. Most likely acts redundantly with the related proteins: D6PKL1,D6PKL2,and D6PKL3. PIN1 is a target of D6PK phosphorylation.S.X.H.G.
0.051.1At1g06060837115RanBPM-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFOS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
64.399.8GSM282698Col_BRZ_rep2GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlings
63.899.8GSM282699Col_BRZ_rep3GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlings
57.799.8GSM282703arf2_brz_2GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlings
56.299.8GSM282697Col_BRZ_rep1GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlings
55.899.8GSM282693arf2_brz_1GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlings
46.199.8GSM131608ATGE_42_DGSE5632AtGenExpress: Developmental series (flowers and pollen)
35.499.7GSM131175AtGen_D-7_1-UL_REP1_ATH1GSE5617AtGenExpress: Light treatments
35.399.7GSM131606ATGE_42_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
35.099.7GSM131170AtGen_D-2_1-FL_REP1_ATH1GSE5617AtGenExpress: Light treatments
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.810779At5g38970833889BR6OX1 (BRASSINOSTEROID-6-OXIDASE 1)Encodes a polypeptide involved in the C-6 oxidation of brassinosteroids. Heterologous expression of the protein in yeast conferred the ability to catalyze multiple reactions in which the C-6 position of 6-deoxocastasterone, 6-deoxotyphasterol, 3-dehydro-6-deoxoteasterone and 6-deoxoteasterone are oxidized.C.G.S.X.
0.022e-138At2g40060818594protein binding / structural moleculeF:protein binding, structural molecule activity;P:intracellular protein transport, vesicle-mediated transport;C:plasma membrane, chloroplast envelope;MOPFBAVC.G.S.X.
0.017e-136At5g08530830752CI51 (51 kDa subunit of complex I)F:4 iron, 4 sulfur cluster binding, NAD or NADH binding, FMN binding, NADH dehydrogenase (ubiquinone) activity, oxidoreductase activity, acting on NADH or NADPH;P:mitochondrial electron transport, NADH to ubiquinone;C:mitochondrion, respiratory chain complex I;OBMFPAC.G.S.X.
0.027e-136At2g043786241027beta-galactosidaseF:beta-galactosidase activity;P:carbohydrate metabolic process;C:endomembrane system, beta-galactosidase complex;PC.G.S.X.
0.017e-136At1g62390842537octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing proteinF:binding;P:unknown;C:unknown;MOFPBAVC.G.S.X.
0.017e-136At1g01460839469PIPK11Type I phosphatidylinositol-4-phosphate 5-kinase, subfamily A.C.G.S.X.
0.017e-136At1g49900841413zinc finger (C2H2 type) family proteinF:transcription factor activity, zinc ion binding, nucleic acid binding;P:unknown;C:intracellular;MOPFBVAC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.241e-24115Glycine maxGmaAffx.68864.1.S1_atBM093001--3e-25At3g30180BR6OX2 (BRASSINOSTEROID-6-OXIDASE 2)C.G.S.X.
0.021e+034Hordeum vulgareContig22078_atContig22078--6e-2At1g10100unknown proteinC.G.S.X.
0.089e-859Oryza sativaOs03g0602300AK101670.1-Cytochrome P450 family protein7e-8At3g30180BR6OX2 (BRASSINOSTEROID-6-OXIDASE 2)C.G.S.X.
0.082e-242Populus trichocarpaPtpAffx.209114.1.S1_atpmrna18029hypothetical protein-1e-8At5g38970BR6OX1 (BRASSINOSTEROID-6-OXIDASE 1)C.G.S.X.
0.022e-138Triticum aestivumTa.1795.1.A1_atBE445285--7e-2At3g30180BR6OX2 (BRASSINOSTEROID-6-OXIDASE 2)C.G.S.X.
0.043e-652Vitis vinifera1608099_atCD800698brassinosteroid-6-oxidase-5e-6At3g30180BR6OX2 (BRASSINOSTEROID-6-OXIDASE 2)C.G.S.X.
0.025e+032Zea maysZm.7756.1.A1_atBQ538566hypothetical protein LOC100279912-1e+0At1g28140unknown proteinC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0016132The chemical reactions and pathways resulting in the formation of brassinosteroids, any of a group of steroid derivatives that occur at very low concentrations in plant tissues and may have hormone-like effects.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00050Link to KaPPA-View 4Brassinosteroid biosynthesis
00347Link to KaPPA-View 4Cytochrome P450

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

00905Link to KEGG PATHWAYBrassinosteroid biosynthesis
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