CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At3g30180

Gene name BR6OX2 (BRASSINOSTEROID-6-OXIDASE 2)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At3g30180 822709 BR6OX2 (BRASSINOSTEROID-6-OXIDASE 2) Encodes a cytochrome p450 enzyme that catalyzes the last reaction in the production of brassinolide. It is capable of converting 6-deoxocastasterone into castasterone, a C-6 oxidation, as well as the further conversion of castasterone into brassinolide by a Baeyer-Villinger oxidation reaction at C-6, resulting in the formation of an unusual seven-membered lactone ring. The enzyme possesses high affinity for both C28- and C27-Brassinosteroids. The expression of the gene using a CYP85A2 promoter:LUC fusion construct was shown to be under circadian and light control. S.X. H.G.
0.33 38.1 At1g61900 842486 unknown protein F:molecular_function unknown;P:biological_process unknown;C:anchored to plasma membrane, plasma membrane, anchored to membrane;P S.X. H.G.
0.27 26.2 At3g57800 825530 basic helix-loop-helix (bHLH) family protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFB S.X. H.G.
0.22 17.5 At2g20230 816542 - F:unknown;P:unknown;C:plasma membrane, vacuole;PO S.X. H.G.
0.17 10.2 At3g57790 824949 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein F:polygalacturonase activity;P:carbohydrate metabolic process;C:plasma membrane;PBFOMAV S.X. H.G.
0.13 5.8 At1g32410 840134 vacuolar protein sorting 55 family protein / VPS55 family protein F:transporter activity;P:transport;C:vacuole;MFPO S.X. H.G.
0.10 3.4 At5g55910 835689 D6PK (D6 PROTEIN KINASE) D6PK is a protein kinase involved that plays a role in polar auxin transport. Most likely acts redundantly with the related proteins: D6PKL1,D6PKL2,and D6PKL3. PIN1 is a target of D6PK phosphorylation. S.X. H.G.
0.05 1.1 At1g06060 837115 RanBPM-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFO S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
64.3 99.8 GSM282698 Col_BRZ_rep2 GSE11216 Brassinazole treatment of arf2 and wild-type dark-grown seedlings
63.8 99.8 GSM282699 Col_BRZ_rep3 GSE11216 Brassinazole treatment of arf2 and wild-type dark-grown seedlings
57.7 99.8 GSM282703 arf2_brz_2 GSE11216 Brassinazole treatment of arf2 and wild-type dark-grown seedlings
56.2 99.8 GSM282697 Col_BRZ_rep1 GSE11216 Brassinazole treatment of arf2 and wild-type dark-grown seedlings
55.8 99.8 GSM282693 arf2_brz_1 GSE11216 Brassinazole treatment of arf2 and wild-type dark-grown seedlings
46.1 99.8 GSM131608 ATGE_42_D GSE5632 AtGenExpress: Developmental series (flowers and pollen)
40.4 99.8 E-MEXP-1474-raw-cel-1593932897
35.4 99.7 GSM131175 AtGen_D-7_1-UL_REP1_ATH1 GSE5617 AtGenExpress: Light treatments
35.3 99.7 GSM131606 ATGE_42_B GSE5632 AtGenExpress: Developmental series (flowers and pollen)
35.0 99.7 GSM131170 AtGen_D-2_1-FL_REP1_ATH1 GSE5617 AtGenExpress: Light treatments
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.81 0 779 At5g38970 833889 BR6OX1 (BRASSINOSTEROID-6-OXIDASE 1) Encodes a polypeptide involved in the C-6 oxidation of brassinosteroids. Heterologous expression of the protein in yeast conferred the ability to catalyze multiple reactions in which the C-6 position of 6-deoxocastasterone, 6-deoxotyphasterol, 3-dehydro-6-deoxoteasterone and 6-deoxoteasterone are oxidized. C.G. S.X.
0.02 2e-1 38 At2g40060 818594 protein binding / structural molecule F:protein binding, structural molecule activity;P:intracellular protein transport, vesicle-mediated transport;C:plasma membrane, chloroplast envelope;MOPFBAV C.G. S.X.
0.01 7e-1 36 At5g08530 830752 CI51 (51 kDa subunit of complex I) F:4 iron, 4 sulfur cluster binding, NAD or NADH binding, FMN binding, NADH dehydrogenase (ubiquinone) activity, oxidoreductase activity, acting on NADH or NADPH;P:mitochondrial electron transport, NADH to ubiquinone;C:mitochondrion, respiratory chain complex I;OBMFPA C.G. S.X.
0.02 7e-1 36 At2g04378 6241027 beta-galactosidase F:beta-galactosidase activity;P:carbohydrate metabolic process;C:endomembrane system, beta-galactosidase complex;P C.G. S.X.
0.01 7e-1 36 At1g62390 842537 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein F:binding;P:unknown;C:unknown;MOFPBAV C.G. S.X.
0.01 7e-1 36 At1g01460 839469 PIPK11 Type I phosphatidylinositol-4-phosphate 5-kinase, subfamily A. C.G. S.X.
0.01 7e-1 36 At1g49900 841413 zinc finger (C2H2 type) family protein F:transcription factor activity, zinc ion binding, nucleic acid binding;P:unknown;C:intracellular;MOPFBVA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.24 1e-24 115 Glycine max GmaAffx.68864.1.S1_at BM093001 - - 3e-25 At3g30180 BR6OX2 (BRASSINOSTEROID-6-OXIDASE 2) C.G. S.X.
0.02 1e+0 34 Hordeum vulgare Contig22078_at Contig22078 - - 6e-2 At1g10100 unknown protein C.G. S.X.
0.08 9e-8 59 Oryza sativa Os03g0602300 AK101670.1 - Cytochrome P450 family protein 7e-8 At3g30180 BR6OX2 (BRASSINOSTEROID-6-OXIDASE 2) C.G. S.X.
0.08 2e-2 42 Populus trichocarpa PtpAffx.209114.1.S1_at pmrna18029 hypothetical protein - 1e-8 At5g38970 BR6OX1 (BRASSINOSTEROID-6-OXIDASE 1) C.G. S.X.
0.02 2e-1 38 Triticum aestivum Ta.1795.1.A1_at BE445285 - - 7e-2 At3g30180 BR6OX2 (BRASSINOSTEROID-6-OXIDASE 2) C.G. S.X.
0.04 3e-6 52 Vitis vinifera 1608099_at CD800698 brassinosteroid-6-oxidase - 5e-6 At3g30180 BR6OX2 (BRASSINOSTEROID-6-OXIDASE 2) C.G. S.X.
0.02 5e+0 32 Zea mays Zm.7756.1.A1_at BQ538566 hypothetical protein LOC100279912 - 1e+0 At1g28140 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0016132 The chemical reactions and pathways resulting in the formation of brassinosteroids, any of a group of steroid derivatives that occur at very low concentrations in plant tissues and may have hormone-like effects.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00050 Brassinosteroid biosynthesis
00347 Cytochrome P450

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
00905 Brassinosteroid biosynthesis
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