Gene omics information

Query gene ID At3g29575
Gene name AFP3 (ABI FIVE BINDING PROTEIN 3)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6075.7At3g29575822619AFP3 (ABI FIVE BINDING PROTEIN 3)F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMS.X.H.G.
0.3846.7At1g73390843674-F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;PFMS.X.H.G.
0.3846.7At4g34000829547ABF3 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3)Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid.S.X.H.G.
0.2726.2At1g72770843609HAB1 (HOMOLOGY TO ABI1)mutant has ABA hypersensitive inhibition of seed germination; Protein Phosphatase 2CS.X.H.G.
0.2420.7At4g26080828714ABI1 (ABA INSENSITIVE 1)Involved in abscisic acid (ABA) signal transduction. Negative regulator of ABA promotion of stomatal closure.S.X.H.G.
0.051.1At1g22640838870MYB3 (MYB DOMAIN PROTEIN 3)MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expressionS.X.H.G.
0.030.6At1g54100841849ALDH7B4 (Aldehyde Dehydrogenase 7B4)Aldehyde dehydrogenaseS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
74.799.9GSM152135Col-0 drought 1GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
61.099.8GSM152145siz1-3 drought 3GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
58.899.8GSM184633Arabidopsis, whole roots, 140 mM NaCl, replicate 2GSE7636Expression analysis of the effect of protoplasting and FACS sorting in roots
55.599.8GSM152143siz1-3 drought 2GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
53.799.8GSM152137Col-0 drought 2GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
48.899.8GSM184632Arabidopsis, whole roots, 140 mM NaCl, replicate 1GSE7636Expression analysis of the effect of protoplasting and FACS sorting in roots
44.199.8GSM152139Col-0 drought 3GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
42.399.8E-MEXP-475-raw-cel-680982449
40.399.8GSM152141siz1-3 drought 1GSE6583Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
38.199.8GSM184846Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 2GSE7639Expression analysis of root developmental zones after treatment with salt
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.076e-961At1g69260843257AFP1 (ABI FIVE BINDING PROTEIN)F:unknown;P:abscisic acid mediated signaling;C:nucleus;POMFC.G.S.X.
0.012e-240At2g25560817094DNAJ heat shock N-terminal domain-containing proteinF:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;BOMPFAVC.G.S.X.
0.029e-238At2g30600817610BTB/POZ domain-containing proteinF:protein binding;P:cell adhesion;C:cellular_component unknown;MPOVFC.G.S.X.
0.019e-238At1g01040839574DCL1 (DICER-LIKE 1)Encodes a Dicer homolog. Dicer is a RNA helicase involved in microRNA processing. Mutations in this locus can result in embryo lethality. Embryo shape at seed maturity is globular-elongate. Other mutants convert the floral meristems to an indeterminate state, others yet show defects in ovule development. mRNA is expressed in all shoot tissues. DCL1 is able to produce miRNAs and siRNAs.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.133e-240Glycine maxGma.17925.1.S1_atBM270546--2e-2At3g29575AFP3 (ABI FIVE BINDING PROTEIN 3)C.G.S.X.
0.042e-136Hordeum vulgareContig9485_atContig9485--8e-1At3g29575AFP3 (ABI FIVE BINDING PROTEIN 3)C.G.S.X.
0.041e-861Oryza sativaOs03g0214200AK068799.1-Hypothetical protein5e-2At1g13740AFP2 (ABI FIVE BINDING PROTEIN 2)C.G.S.X.
0.101e-1067Populus trichocarpaPtpAffx.50616.1.A1_atCV239482hypothetical protein-1e-10At3g29575AFP3 (ABI FIVE BINDING PROTEIN 3)C.G.S.X.
0.062e-654Triticum aestivumTaAffx.7064.3.A1_atCA699318--2e+1At3g29575AFP3 (ABI FIVE BINDING PROTEIN 3)C.G.S.X.
0.041e-136Vitis vinifera1616211_atCF415232hypothetical protein LOC100250444-8e-1At3g27630unknown proteinC.G.S.X.
0.036e-134Zea maysZm.7150.3.S1_atAY109249.1--2e+0At3g29575AFP3 (ABI FIVE BINDING PROTEIN 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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