Gene omics information

Query gene ID At3g28770
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g28770822509unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MOBFPVAS.X.H.G.
0.9195.6At5g37060833677ATCHX24member of Putative Na+/H+ antiporter familyS.X.H.G.
0.9195.6At5g39310833927ATEXPA24 (ARABIDOPSIS THALIANA EXPANSIN A24)member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)S.X.H.G.
0.7788.0At5g01690830460ATCHX27member of Putative Na+/H+ antiporter familyS.X.H.G.
0.5773.8At1g79250844265AGC1.7 (AGC KINASE 1.7)F:kinase activity;P:pollen tube growth, unidimensional cell growth;C:unknown;MOPFBVAS.X.H.G.
0.5673.0At4g15980827282pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:apoplast, plant-type cell wall;BMOPFAVS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
842.5100.0E-MEXP-1138-raw-cel-1432773258
759.2100.0E-MEXP-1138-raw-cel-1432773322
692.0100.0E-MEXP-1138-raw-cel-1432773290
335.0100.0GSM142736DH001_ATH1_A3-TCP1GSE6162Transcriptome analysis of Arabidopsis microgametogenesis
334.0100.0GSM106916opr3_JA_22 hrs_Rep2GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
267.6100.0E-MEXP-1138-raw-cel-1432773066
233.0100.0E-MEXP-1138-raw-cel-1432773034
176.3100.0GSM142739DH001_ATH1_A6-TCP2GSE6162Transcriptome analysis of Arabidopsis microgametogenesis
164.5100.0GSM106917opr3_JA_22 hrs_Rep3GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
140.199.9GSM106969opr3_OPDA_22 hrs_Rep2GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.002e-140At5g15920831449structural maintenance of chromosomes (SMC) family protein (MSS2)F:ATP binding;P:chromosome segregation;C:chromosome, nucleus;MOBFPAVC.G.S.X.
0.018e-138At5g58530835966glutaredoxin family proteinF:electron carrier activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:unknown;PMOBFC.G.S.X.
0.018e-138At3g21520821706unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.018e-138At3g07920819983translation initiation factorF:translation initiation factor activity;P:translational initiation;C:cellular_component unknown;MOAFPVC.G.S.X.
0.018e-138At3g52570824423ATP bindingF:ATP binding;P:unknown;C:mitochondrion;BOMFPAC.G.S.X.
0.018e-138At2g45590819167protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;PMOFBVAC.G.S.X.
0.008e-138At2g39280818513RAB GTPase activatorF:RAB GTPase activator activity;P:regulation of Rab GTPase activity;C:intracellular;MOFPBAVC.G.S.X.
0.013e+036At5g15010831353pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POMFBAC.G.S.X.
0.003e+036At5g46330834676FLS2 (FLAGELLIN-SENSITIVE 2)Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB.C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.012e-244Glycine maxGma.16450.1.S1_atCA803065--2e-10At4g18070unknown proteinC.G.S.X.
0.011e-140Hordeum vulgareContig22007_atContig22007--3e+0At5g10440CYCD4C.G.S.X.
0.011e-142Oryza sativaOsAffx.19051.1.S1_at---0C.G.S.X.
0.013e-140Populus trichocarpaPtpAffx.59515.1.S1_s_atBU895418hypothetical protein-2e-2At5g61470zinc finger (C2H2 type) family proteinC.G.S.X.
0.013e+036Triticum aestivumTaAffx.7671.1.S1_atCA653975--1e+0At4g22700LBD32 (LOB DOMAIN-CONTAINING PROTEIN 32)C.G.S.X.
0.012e-138Vitis vinifera1620023_atCF204115.1--1e+0At2g29605unknown proteinC.G.S.X.
0.015e+034Zea maysZm.9472.1.A1_atCF006768hypothetical protein LOC100276276-6e-6At5g23760heavy-metal-associated domain-containing proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage