Gene omics information

Query gene ID At3g27785
Gene name MYB118
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6781.6At3g27785822399MYB118putative transcription factor (MYB118)S.X.H.G.
0.9296.0At1g34410840344ARF21 (AUXIN RESPONSE FACTOR 21)F:transcription factor activity;P:regulation of transcription;C:nucleus;PS.X.H.G.
0.8793.5At3g04100819565AGL57F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMFOS.X.H.G.
0.8793.5At1g34170840316transcription factorF:transcription factor activity;P:regulation of transcription;C:nucleus;PS.X.H.G.
0.8693.1At2g23250816857UGT84B2 (UDP-glucosyl transferase 84B2)F:UDP-glycosyltransferase activity, abscisic acid glucosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:unknown;PMBVFOS.X.H.G.
0.8491.9At3g12190820396-F:molecular_function unknown;P:biological_process unknown;C:unknown;MOBFPAVS.X.H.G.
0.8491.9At2g19500816469CKX2 (CYTOKININ OXIDASE 2)It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.S.X.H.G.
0.8290.9At5g40680834068kelch repeat-containing F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;MPOBFAS.X.H.G.
0.8190.4At5g35900833576LBD35 (LOB DOMAIN-CONTAINING PROTEIN 35)F:unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.8089.8At5g15000831352-Encodes a ECA1 gametogenesis related family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
389.2100.0GSM284389Arabidopsis GMPE2GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
276.6100.0GSM311290Laser capture microdissected (LCM) cellularized endosperm at the linear-cotyledon stage, biological replicate 2GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
254.7100.0GSM284388Arabidopsis GMPE1GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
238.8100.0GSM311289Laser capture microdissected (LCM) cellularized endosperm at the linear-cotyledon stage, biological replicate 1GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
225.2100.0GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
217.4100.0GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
198.1100.0GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
193.2100.0GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
188.9100.0GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
187.7100.0GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.073e-1273At5g58850836002MYB119 (MYB DOMAIN PROTEIN 119)Encodes a putative transcription factor, member of the R2R3 factor gene family (MYB119).C.G.S.X.
0.077e-1065At5g11050830972MYB64 (myb domain protein 64)Member of R2R3-MYB transcription factor gene family.C.G.S.X.
0.094e-859At5g40360834034MYB115 (myb domain protein 115)putative transcription factor (MYB115)C.G.S.X.
0.023e-654At5g56110835710ATMYB103 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 103)Encodes a member of the R2R3 MYB transcription factor gene family that is required for anther development by regulation tapetum development, callose dissolution and exine formation. It acts upstream of MS2.C.G.S.X.
0.071e-552At4g18770827611MYB98 (myb domain protein 98)MYB98 is a member of the R2R3-MYB gene family, the members of which likely encode transcription factors. Within an ovule, MYB98 is expressed exclusively in the synergid cells, and mutations in this gene affect the female gametophyte specifically. myb98 female gametophytes are affected in two unique features of the synergid cell, pollen tube guidance and the filiform apparatus, but are otherwise normal. This suggests that MYB98 controls the development of specific features within the synergid cell during female gametophyte development. MYB98 also is expressed in trichomes and endosperm. Homozygous myb98 mutants exhibit no sporophytic defects, including trichome and endosperm defects.C.G.S.X.
0.037e-446At5g40430834041MYB22 (myb domain protein 22)Encodes a putative transcription factor (MYB22).C.G.S.X.
0.033e-344At2g23290816861AtMYB70 (myb domain protein 70)Member of the R2R3 factor gene family.C.G.S.X.
0.023e-344At1g08810837403MYB60 (myb domain protein 60)putative transcription factor of the R2R3-MYB gene family. Transcript increases under conditions that promote stomatal opening (white and blue light, abi1-1 mutation) and decreases under conditions that trigger stomatal closure (ABA, desiccation, darkness), with the exception of elevated CO2. Expressed exclusively in guard cells of all tissues. It is required for light-induced opening of stomata. Mutant shows reduced stomatal aperture which helps to limit water loss during drought.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.046e-240Glycine maxGmaAffx.83663.1.S1_atAW596799MYB transcription factor MYB187-9e-52At3g28910MYB30 (MYB DOMAIN PROTEIN 30)C.G.S.X.
0.021e+034Hordeum vulgareContig1181_x_atContig1181--8e-15At5g59910HTB4C.G.S.X.
0.043e-757Oryza sativaOsAffx.27479.1.S1_at---0C.G.S.X.
0.152e-757Populus trichocarpaPtpAffx.200959.1.S1_atpmrna1879hypothetical protein-4e-8At3g27785MYB118C.G.S.X.
0.023e+034Triticum aestivumTa.1440.3.S1_a_atCA629316--2e-1At3g04590DNA-binding family proteinC.G.S.X.
0.022e-136Vitis vinifera1612089_atCF212718--2e+0At5g12235CLE22 (CLAVATA3/ESR-RELATED 22)C.G.S.X.
0.014e+032Zea maysZm.6741.1.A1_atAI396113hypothetical protein LOC100275507-6e+0At5g60330unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006355Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
LGO:0045449Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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