Gene omics information

Query gene ID At3g27410
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5368.6At3g27410822362unknown proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PS.X.H.G.
0.8994.6At3g19690821506pathogenesis-related protein, putativeF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFOBS.X.H.G.
0.8994.6At5g20340832156BG5 (beta-1,3-glucanase 5)Encodes a putative beta 1,3-glucanase.S.X.H.G.
0.8994.6At5g42260834231BGLU12 (BETA GLUCOSIDASE 12)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFAS.X.H.G.
0.8693.1At5g35380833499protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation, response to stress;C:cellular_component unknown;MPOBFVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
1915.3100.0GSM154507Arabidopsis growing pollen tubes rep1GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
981.1100.0GSM154508Arabidopsis growing pollen tubes rep2GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
212.9100.0E-MEXP-285-raw-cel-440782791
180.6100.0E-MEXP-285-raw-cel-440782725
126.199.9GSM154505Arabidopsis hydrated pollen grains rep1GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
106.599.9GSM131638ATGE_73_CGSE5632AtGenExpress: Developmental series (flowers and pollen)
99.199.9GSM131637ATGE_73_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
81.599.9GSM239253CaMV::DME pollenGSE9408Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
79.699.9GSM239251Columbia glabrous (C24) wild type pollenGSE9408Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
68.299.9GSM131636ATGE_73_AGSE5632AtGenExpress: Developmental series (flowers and pollen)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.011e-240At3g45830823726unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFBVC.G.S.X.
0.015e-238At5g17790831647VAR3 (VARIEGATED 3)Encodes a 85.9 kDa protein containing novel repeats and zinc fingers described as protein interaction domains. VAR3 is a part of a protein complex required for normal chloroplast and palisade cell development. Mutants display a variegated phenotype due to somatic areas lacking or containing developmentally retarded chloroplasts and greatly reduced numbers of palisade cells.C.G.S.X.
0.022e-136At5g51350835209leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;PMOBFAVC.G.S.X.
0.012e-136At2g23360816868transport protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPAVC.G.S.X.
0.018e-134At4g03230828018ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar bindingF:in 6 functions;P:protein amino acid phosphorylation, recognition of pollen;C:cellular_component unknown;MPOBFVAC.G.S.X.
0.018e-134At4g32640829399protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:intracellular protein transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFOBPVAC.G.S.X.
0.018e-134At3g13640820568ATRLI1member of RLI subfamilyC.G.S.X.
0.028e-134At1g75130843850CYP721A1member of CYP721AC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e+034Glycine maxGmaAffx.75507.1.A1_atBE822138--2e-10At5g23100unknown proteinC.G.S.X.
0.032e+032Hordeum vulgareContig25113_atContig25113--5e+0At5g67520adenylylsulfate kinase, putativeC.G.S.X.
0.042e+034Oryza sativaOsAffx.24176.1.S1_at---0C.G.S.X.
0.051e+034Populus trichocarpaPtpAffx.208495.1.S1_atpmrna16870hypothetical protein-1e-5At1g06330copper-binding family proteinC.G.S.X.
0.058e-134Triticum aestivumTaAffx.77819.1.S1_atCA742422--8e+0At3g07590small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putativeC.G.S.X.
0.046e-236Vitis vinifera1619910_atCF405078--2e-1At3g27410unknown proteinC.G.S.X.
0.045e+030Zea maysZmAffx.1316.1.S1_at40794996-30--6e-1At1g78172unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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