Gene omics information

Query gene ID At3g26740
Gene name CCL (CCR-LIKE)
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g26740822286CCL (CCR-LIKE)transcripts are differentially regulated at the level of mRNA stability at different times of day controlled by the circadian clock. mRNAs are targets of the mRNA degradation pathway mediated by the downstream (DST) instability determinant.S.X.H.G.
0.6781.6At1g06460837158ACD32.1 (ALPHA-CRYSTALLIN DOMAIN 32.1)ACD32.1 encodes an alpha-crystallin domain containing protein with homology to small heat shock proteins.S.X.H.G.
0.5368.6At5g06690830558WCRKC1 (WCRKC THIOREDOXIN 1)Encodes a thioredoxin (WCRKC1) localized in chloroplast stroma. Contains a WCRKC motif.S.X.H.G.
0.4050.8At3g15840820827PIFI (post-illumination chlorophyll fluorescence increase)Encodes a chloroplast-targeted protein localized in the stroma that is a novel component essential for NDH-mediated non-photochemical reduction of the plastoquinone pool in chlororespiratory electron transport.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.042e-136At4g249722745725TPD1 (TAPETUM DETERMINANT 1)Encodes a novel small protein which is similar to proteins of unknown function from other plant species. TPD1 is involved in cell specification during anther and pollen development. Identified in a screen for male steriles. Mutants lack tapetal cells and have an increased number of microsporocytes. Expressed in flower buds, leaves and young seedlings. In anthers, TPD1 is expressed throughout pollen development in parietal cells and sporocytes. Physically interacts with the LRR kinase EMS1 and that interaction results in phosphorylation of TPD1.C.G.S.X.
0.038e-134At4g12030826811bile acid:sodium symporter family proteinF:transporter activity, bile acid:sodium symporter activity;P:sodium ion transport;C:membrane;OBMPAC.G.S.X.
0.018e-134At2g24230816957leucine-rich repeat transmembrane protein kinase, putativeF:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.038e-134At1g19540838541isoflavone reductase, putativeF:transcription repressor activity, binding, catalytic activity;P:regulation of nitrogen utilization, metabolic process;C:cellular_component unknown;BPFOVMAC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.063e-136Glycine maxGma.10933.2.S1_a_atCD397232--4e-1At3g26740CCL (CCR-LIKE)C.G.S.X.
0.042e+032Hordeum vulgareContig22650_atContig22650--3e+0At3g26740CCL (CCR-LIKE)C.G.S.X.
0.032e+034Oryza sativaOs.6828.1.S1_at---0C.G.S.X.
0.045e+032Populus trichocarpaPtpAffx.222617.1.S1_atpmrna40155hypothetical protein-2e+0At3g26740CCL (CCR-LIKE)C.G.S.X.
0.073e+032Triticum aestivumTa.30807.2.S1_s_atCK212722--5e+0At2g17450RHA3AC.G.S.X.
0.127e-1785Vitis vinifera1619945_atCB345883hypothetical protein LOC100245467-4e-16At3g26740CCL (CCR-LIKE)C.G.S.X.
0.024e-134Zea maysZm.2132.1.S1_atBM381800hypothetical protein LOC100274542-6e-1At5g03790HB51C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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