Gene omics information

Query gene ID At3g26690
Gene name ATNUDX13 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 13)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5469.5At3g26690822281ATNUDX13 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 13)Encodes AtNUDT13, a mitochondrial Nudix hydrolase specific for long-chain diadenosine polyphosphates.S.X.H.G.
0.4963.5At1g78340844169ATGSTU22 (GLUTATHIONE S-TRANSFERASE TAU 22)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).S.X.H.G.
0.4862.5At2g27000817242CYP705A8member of CYP705AS.X.H.G.
0.4761.2At5g39970833994catalyticF:catalytic activity;P:biological_process unknown;C:anchored to membrane;OBPMAFS.X.H.G.
0.4558.3At3g19390821473cysteine proteinase, putative / thiol protease, putativeF:cysteine-type endopeptidase activity, cysteine-type peptidase activity;P:proteolysis;C:endomembrane system;MOPBVAFS.X.H.G.
0.4253.9At1g69810843317WRKY36member of WRKY Transcription Factor; Group II-bS.X.H.G.
0.4152.4At5g17330831599GADEncodes one of two isoforms of glutamate decarboxylase.S.X.H.G.
0.4152.4At2g14100815896CYP705A13a member of the cytochrome P450 familyS.X.H.G.
0.4050.8At5g44380834464FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:response to oxidative stress;C:cell wall;BFOPAMS.X.H.G.
0.4050.8At5g54020835485zinc ion bindingF:zinc ion binding;P:intracellular signaling cascade;C:intracellular;PMOFS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
167.7100.0GSM133759Lindsey_1-9_heart-stage-cotyledon_Rep3_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
73.599.9GSM184477Lateral Root Cap root cells 2hr KCl control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
66.399.8GSM184517Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
64.599.8GSM265425Arabidopsis, root, longitudinal zone 4, standard conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
56.899.8GSM184516Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
55.699.8GSM226548Slice6JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
55.599.8GSM226549Slice7JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
47.699.8GSM133984Birnbaum_1-14_StageIII-3_Rep3_ATH1GSE5749A gene expression map of the Arabidopsis root
47.299.8GSM265431Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
46.199.8GSM184520Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.605e-77287At1g12880837845atnudt12 (Arabidopsis thaliana Nudix hydrolase homolog 12)F:hydrolase activity;P:biological_process unknown;C:unknown;BMPOFC.G.S.X.
0.017e-238At5g50210835086QS (QUINOLINATE SYNTHASE)Encodes an Fe-S binding protein with quinolinate synthase (QS) activity and cysteine desulfurase activator activity. The QS activity was demonstrated by functional complementation of corresponding E. coli mutants and complementation of embryo-lethal phenotypes of the QS homozygous null allele in Arabidopsis. The SufE domain of the protein also stimulates the cysteine desulfurase activity of CpNifS (AT1G08490) in vitro. This protein binds a (4Fe-Su)2+ cluster in its NadA domain and is localized in the chloroplast.C.G.S.X.
0.017e-238At5g02310830916PRT6 (PROTEOLYSIS 6)Encodes PROTEOLYSIS6 (PRT6), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Another component of the N-end rule pathway is arginyl-tRNA:protein arginyltransferase (ATE). Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination.C.G.S.X.
0.013e-136At5g51330835207SWI1 (SWITCH1)Encodes novel protein involved in sister chromatid cohesion and meiotic chromosome organization during both male and female meiosis. Gene has two alternate transcripts which produce two similar proteins, one 57 aa shorter than the other.C.G.S.X.
0.033e-136At5g46250834667RNA recognition motif (RRM)-containing proteinF:RNA binding, nucleotide binding, nucleic acid binding;P:RNA processing;C:ribonucleoprotein complex, nucleus;MPFOC.G.S.X.
0.023e-136At5g41170834119pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:unknown;POMFBAC.G.S.X.
0.023e-136At4g10500826642oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:secondary metabolic process;C:unknown;POBFMC.G.S.X.
0.013e-136At4g10710826665SPT16 (global transcription factor C)encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SPT16.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.158e-1891Glycine maxGmaAffx.76926.1.S1_atBM732842--5e-21At1g12880atnudt12 (Arabidopsis thaliana Nudix hydrolase homolog 12)C.G.S.X.
0.083e-961Hordeum vulgareContig9301_atContig9301--3e-2At1g14860atnudt18 (Arabidopsis thaliana Nudix hydrolase homolog 18)C.G.S.X.
0.073e-963Oryza sativaOs07g0212300BI801817-NUDIX hydrolase domain containing protein4e+0At5g01280-C.G.S.X.
0.187e-342Populus trichocarpaPtpAffx.200269.1.S1_atpmrna529hypothetical protein-4e-3At3g26690ATNUDX13 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 13)C.G.S.X.
0.081e-344Triticum aestivumTa.5700.2.S1_a_atBE213377--2e-3At3g26690ATNUDX13 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 13)C.G.S.X.
0.072e-548Vitis vinifera1617961_atCB973482hypothetical protein LOC100242908-4e-5At1g12880atnudt12 (Arabidopsis thaliana Nudix hydrolase homolog 12)C.G.S.X.
0.072e-961Zea maysZm.8879.1.A1_atBM334135nudix hydrolase 13-3e-9At3g12600atnudt16 (Arabidopsis thaliana Nudix hydrolase homolog 16)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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