Gene omics information

Query gene ID At3g26580
Gene name -
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8391.4At3g26580822266-F:unknown;P:biological_process unknown;C:chloroplast thylakoid membrane;MOFPBVAS.X.H.G.
0.5773.8At4g27990828912YGGT family proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast, chloroplast envelope;BOPS.X.H.G.
0.5368.6At4g27800828893protein phosphatase 2C PPH1 / PP2C PPH1 (PPH1)F:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:nucleolus, nucleus, chloroplast, protein serine/threonine phosphatase complex, cytoplasm;PMOFBVAS.X.H.G.
0.4355.3At5g11840831057unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;OBPS.X.H.G.
0.4050.8At3g15840820827PIFI (post-illumination chlorophyll fluorescence increase)Encodes a chloroplast-targeted protein localized in the stroma that is a novel component essential for NDH-mediated non-photochemical reduction of the plastoquinone pool in chlororespiratory electron transport.S.X.H.G.
0.4050.8At5g05200830402ABC1 family proteinF:protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast, plastoglobule;OBMPFAVS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
28.499.7GSM269827C2 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
27.399.7GSM269817T8 leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
27.199.7GSM269825T8 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
25.599.7GSM269823T6 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
25.299.6GSM269831T6 leaf-drought-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
24.999.6GSM269819C2 leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
24.999.6GSM269821WT leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
20.699.6GSM269813WT leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
19.299.6GSM25316548h into an extended nightBGSE10016Expression data of Arabidopsis thaliana rosettes in an extended night
17.999.5E-ATMX-6-raw-cel-1308219150
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.013e-240At5g01170831732glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFVBC.G.S.X.
0.021e-138At5g64700836591nodulin MtN21 family proteinF:molecular_function unknown;P:unknown;C:membrane;OBPAMFC.G.S.X.
0.021e-138At5g43190834337F-box family protein (FBX6)F:ubiquitin-protein ligase activity;P:ubiquitin-dependent protein catabolic process;C:unknown;PFOC.G.S.X.
0.011e-138At4g13340826964leucine-rich repeat family protein / extensin family proteinF:structural constituent of cell wall, protein binding;P:unknown;C:cell wall, plant-type cell wall;MBPOFVAC.G.S.X.
0.011e-138At3g26400822244EIF4B1member of eIF4B - eukaryotic initiation factor 4BC.G.S.X.
0.011e-138At3g19540821490unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PMFVBOC.G.S.X.
0.011e-138At1g65280842835heat shock protein bindingF:heat shock protein binding;P:protein folding;C:unknown;MOBFPAVC.G.S.X.
0.035e-136At5g42635834271glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFMBC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.382e-1997Glycine maxGmaAffx.6017.2.S1_atBI469662--2e-24At3g26580-C.G.S.X.
0.031e+034Hordeum vulgareHVSMEn0015C19r2_atHVSMEn0015C19r2--7e-2At4g13850GR-RBP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2)C.G.S.X.
0.063e-448Oryza sativaOs03g0428800AK060233.1-TPR-like domain containing protein2e-4At3g26580-C.G.S.X.
0.287e-38159Populus trichocarpaPtp.5114.1.S1_atCV265551hypothetical protein-3e-38At3g26580-C.G.S.X.
0.032e+034Triticum aestivumTaAffx.83851.1.S1_atCA649572--5e-1At3g13227serine-rich protein-relatedC.G.S.X.
0.208e-1993Vitis vinifera1608361_atCF517494hypothetical protein LOC100264929-3e-18At3g26580-C.G.S.X.
0.029e-134Zea maysZm.19198.1.S1_atCO533068hypothetical protein LOC100217098-2e+0At3g26580-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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