CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At3g26460

Gene name major latex protein-related / MLP-related

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.78 88.6 At3g26460 822251 major latex protein-related / MLP-related F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P S.X. H.G.
0.64 78.9 At4g14060 827042 major latex protein-related / MLP-related F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P S.X. H.G.
0.56 73.0 At5g37990 833778 S-adenosylmethionine-dependent methyltransferase/ methyltransferase F:S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity;P:biological_process unknown;C:endomembrane system;POBMF S.X. H.G.
0.38 46.7 At2g47200 819333 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.36 43.6 At2g18370 816352 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. S.X. H.G.
0.35 41.6 At4g28940 829015 catalytic F:catalytic activity;P:nucleoside metabolic process;C:endomembrane system;BPO S.X. H.G.
0.35 41.6 At5g38020 833781 S-adenosyl-L-methionine:carboxyl methyltransferase family protein encodes a protein whose sequence is similar to SAM:salicylic acid carboxyl methyltransferase (SAMT) (GI:6002712)(Clarkia breweri) and to SAM:benzoic acid carboxyl methyltransferase (BAMT)(GI:9789277)(Antirrhinum majus) S.X. H.G.
0.33 38.1 At3g58550 825024 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:anchored to membrane;P S.X. H.G.
0.29 30.3 At5g36140 833611 CYP716A2 member of CYP716A S.X. H.G.
0.27 26.2 At1g78990 844239 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFB S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
271.4 100.0 E-MEXP-791-raw-cel-1122937578
269.7 100.0 GSM142675 SF002_ATH1_A6-Fille-WT+dex GSE6155 Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
264.7 100.0 GSM142669 SF002_ATH1_A7-Fille-ANGR4-12nodex GSE6155 Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
261.0 100.0 E-MEXP-791-raw-cel-1122937623
180.2 100.0 GSM142670 SF002_ATH1_A8-Fille-ANGR4-12+dex GSE6155 Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
175.9 100.0 E-MEXP-791-raw-cel-1122937587
174.7 100.0 GSM142674 SF002_ATH1_A5-Fille-WTnodex GSE6155 Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
170.8 100.0 E-MEXP-791-raw-cel-1122937614
90.5 99.9 GSM142672 SF001_ATH1_A2-Fille-WT-+dex GSE6155 Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
86.2 99.9 GSM237280 Root control rep 1 GSE9311 Gene expression in roots and shoots of plants grown on selenate
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.93 0 640 At3g26450 822250 major latex protein-related / MLP-related F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P C.G. S.X.
0.77 7e-60 230 At4g23680 828468 major latex protein-related / MLP-related F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P C.G. S.X.
0.73 1e-49 196 At4g23670 828467 major latex protein-related / MLP-related F:copper ion binding;P:response to cadmium ion, response to salt stress, defense response to bacterium;C:vacuole;P C.G. S.X.
0.61 9e-38 157 At2g01520 814681 MLP328 (MLP-LIKE PROTEIN 328) F:copper ion binding;P:response to biotic stimulus, defense response;C:cellular_component unknown;P C.G. S.X.
0.58 4e-37 155 At4g14060 827042 major latex protein-related / MLP-related F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P C.G. S.X.
0.49 2e-26 119 At2g01530 814682 MLP329 (MLP-LIKE PROTEIN 329) F:copper ion binding;P:response to biotic stimulus, defense response;C:cellular_component unknown;P C.G. S.X.
0.39 3e-25 115 At1g14960 838061 major latex protein-related / MLP-related F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P C.G. S.X.
0.65 2e-23 109 At1g14950 838060 major latex protein-related / MLP-related F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P C.G. S.X.
0.43 7e-14 77 At1g14940 838059 major latex protein-related / MLP-related F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e+0 34 Glycine max GmaAffx.25874.1.S1_at AW598319 - - 8e-1 At3g26460 major latex protein-related / MLP-related C.G. S.X.
0.04 2e+0 32 Hordeum vulgare Contig19894_at Contig19894 - - 9e-1 At2g35640 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.04 2e+0 34 Oryza sativa Os03g0266500 9631.m01552 - - 3e+0 At2g11890 adenylate cyclase C.G. S.X.
0.04 1e+0 34 Populus trichocarpa PtpAffx.206526.1.S1_at pmrna12946 hypothetical protein - 8e-4 At1g30890 integral membrane HRF1 family protein C.G. S.X.
0.04 4e+0 32 Triticum aestivum TaAffx.78881.1.S1_at CA725309 - - 2e-1 At4g00270 DNA-binding storekeeper protein-related C.G. S.X.
0.04 3e-1 34 Vitis vinifera 1620550_at AY427083.1 - - 2e-1 At3g63420 AGG1 (Arabidopsis Ggamma-subunit 1) C.G. S.X.
0.03 2e+0 32 Zea mays Zm.2931.1.A1_at AY111692.1 hypothetical protein LOC100216876 - 2e+0 At1g60280 ANAC023 (Arabidopsis NAC domain containing protein 23) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006952 Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
L GO:0009607 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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