CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At3g26200

Gene name CYP71B22

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.27 26.2 At3g26200 822221 CYP71B22 putative cytochrome P450 S.X. H.G.
0.67 81.6 At3g23550 821934 MATE efflux family protein F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFAM S.X. H.G.
0.67 81.6 At5g61160 836237 AACT1 (anthocyanin 5-aromatic acyltransferase 1) F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PF S.X. H.G.
0.40 50.8 At1g06160 837125 ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. S.X. H.G.
0.33 38.1 At3g16530 820901 legume lectin family protein Lectin like protein whose expression is induced upon treatment with chitin oligomers. S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
553.4 100.0 GSM216981 Vector_shoots_4h_GA4+DEX_repl2 GSE8741 DELLA protein direct targets in Arabidopsis
432.6 100.0 GSM216973 Vector_shoots_4h_GA4+DEX_repl1 GSE8741 DELLA protein direct targets in Arabidopsis
82.2 99.9 GSM133030 BC482-2 GSE5684 AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
70.4 99.9 GSM131160 AtGen_C-10_1-Pi-6_REP1_ATH1 GSE5616 AtGenExpress: Response to Phytophthora infestans
66.4 99.8 GSM131161 AtGen_C-11_2-Pi-6_REP2_ATH1 GSE5616 AtGenExpress: Response to Phytophthora infestans
60.9 99.8 E-MEXP-807-raw-cel-1173272977
59.2 99.8 GSM133029 BC482-1 GSE5684 AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
55.1 99.8 GSM133025 BC181-1 GSE5684 AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
52.4 99.8 GSM322554 genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep1 GSE12856 Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
52.0 99.8 GSM131162 AtGen_C-12_3-Pi-6_REP3_ATH1 GSE5616 AtGenExpress: Response to Phytophthora infestans
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.86 0 1439 At3g26190 822220 CYP71B21 putative cytochrome P450 C.G. S.X.
0.66 3e-99 363 At3g44250 823550 CYP71B38 putative cytochrome P450 C.G. S.X.
0.66 3e-80 299 At3g53280 824495 CYP71B5 (CYTOCHROME P450 71B5) cytochrome P450 monooxygenase C.G. S.X.
0.42 9e-56 218 At3g53300 824497 CYP71B31 putative cytochrome P450 C.G. S.X.
0.46 2e-50 200 At5g35715 833546 CYP71B8 encodes a protein with cytochrome P450 domain C.G. S.X.
0.50 4e-24 113 At3g53290 824496 CYP71B30P missing N-term 80 AA not found between end of 71B5 and start of this sequence probably a pseudogene, from http://drnelson.utmem.edu/biblioD.html C.G. S.X.
0.33 6e-20 99 At3g53305 824498 CYP71B32 putative cytochrome P450 C.G. S.X.
0.13 2e-13 77 At3g26220 822223 CYP71B3 cytochrome P450 monooxygenase C.G. S.X.
0.06 9e-13 75 At5g02650 831848 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 3e-1 38 Glycine max GmaAffx.55759.1.S1_at BM954946 - - 1e-2 At5g03130 unknown protein C.G. S.X.
0.02 6e-3 42 Hordeum vulgare Contig11295_at Contig11295 - - 1e+0 At2g45560 CYP76C1 C.G. S.X.
0.02 6e+0 34 Oryza sativa OsAffx.8268.1.A1_at - - - 0 C.G. S.X.
0.02 3e-1 38 Populus trichocarpa Ptp.5109.1.S1_at BU810061 cytochrome P450 /// cytochrome P450 /// cytochrome P450 - 6e-2 At3g44250 CYP71B38 C.G. S.X.
0.02 3e+0 34 Triticum aestivum TaAffx.29435.1.S1_at CA642962 - - 1e+1 At4g20330 transcription initiation factor-related C.G. S.X.
0.04 4e+0 32 Vitis vinifera 1621363_at CA809467 hypothetical protein LOC100250687 - 5e-4 At1g13080 CYP71B2 (CYTOCHROME P450 71B2) C.G. S.X.
0.02 5e+0 32 Zea mays Zm.6456.2.A1_at AI691816 - - 3e+0 At3g21590 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00347 Cytochrome P450

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
00903 Limonene and pinene degradation
00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
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