CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At3g26190

Gene name CYP71B21

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At3g26190 822220 CYP71B21 putative cytochrome P450 S.X. H.G.
0.65 79.6 At5g28160 832891 kelch repeat-containing F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM S.X. H.G.
0.63 78.1 At3g23650 821945 protein kinase-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.63 78.1 At4g08450 826403 disease resistance protein (TIR-NBS-LRR class), putative F:transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;BPOMFVA S.X. H.G.
0.62 77.3 At2g07130 3767761 - F:unknown;P:unknown;C:unknown S.X. H.G.
0.60 75.7 At5g27570 832817 WD-40 repeat family protein F:signal transducer activity;P:signal transduction;C:CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex;MFBOPA S.X. H.G.
0.58 73.8 At1g57906 842163 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.57 73.8 At1g36830 3767037 transposable element gene F:unknown;P:unknown;C:unknown S.X. H.G.
0.57 73.8 At1g09030 837424 NF-YB4 (NUCLEAR FACTOR Y, SUBUNIT B4) F:transcription factor activity;P:regulation of transcription;C:intracellular, nucleus;MPFO S.X. H.G.
0.56 73.0 At5g35600 833525 HDA7 (histone deacetylase7) F:histone deacetylase activity;P:histone deacetylation;C:nucleus;OBMFPA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
365.4 100.0 GSM143298 Low_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
325.7 100.0 GSM253645 High_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
320.3 100.0 GSM143300 Ts_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
280.1 100.0 GSM143301 Ts_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
273.2 100.0 GSM253651 Ler 1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
256.1 100.0 GSM143310 Tsu_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
251.6 100.0 GSM253646 Low_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
243.1 100.0 GSM143309 Tsu_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
236.3 100.0 GSM143307 Low_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
231.4 100.0 GSM143308 Tsu_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.86 0 1439 At3g26200 822221 CYP71B22 putative cytochrome P450 C.G. S.X.
0.63 4e-129 462 At3g53280 824495 CYP71B5 (CYTOCHROME P450 71B5) cytochrome P450 monooxygenase C.G. S.X.
0.73 8e-115 414 At3g44250 823550 CYP71B38 putative cytochrome P450 C.G. S.X.
0.53 1e-73 278 At5g35715 833546 CYP71B8 encodes a protein with cytochrome P450 domain C.G. S.X.
0.58 7e-72 272 At3g53300 824497 CYP71B31 putative cytochrome P450 C.G. S.X.
0.60 1e-61 238 At3g53290 824496 CYP71B30P missing N-term 80 AA not found between end of 71B5 and start of this sequence probably a pseudogene, from http://drnelson.utmem.edu/biblioD.html C.G. S.X.
0.09 4e-21 103 At3g26220 822223 CYP71B3 cytochrome P450 monooxygenase C.G. S.X.
0.40 6e-20 99 At3g53305 824498 CYP71B32 putative cytochrome P450 C.G. S.X.
0.06 9e-16 85 At3g26270 822230 CYP71B25 putative cytochrome P450 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e-1 38 Glycine max GmaAffx.5100.1.S1_at BU546067 - - 2e-3 At3g26230 CYP71B24 C.G. S.X.
0.02 1e+0 34 Hordeum vulgare HVSMEf0003G07r2_at HVSMEf0003G07r2 - - 5e-1 At1g58170 disease resistance-responsive protein-related / dirigent protein-related C.G. S.X.
0.02 2e+0 36 Oryza sativa Os09g0134200 9637.m00333 - - 2e+0 At5g67640 unknown protein C.G. S.X.
0.02 4e+0 34 Populus trichocarpa PtpAffx.89550.1.S1_s_at AJ779925 hypothetical protein - 5e-10 At2g26670 TED4 (REVERSAL OF THE DET PHENOTYPE 4) C.G. S.X.
0.02 8e-1 36 Triticum aestivum TaAffx.54796.1.S1_at CA676875 - - 4e+0 At4g11250 AGL52 C.G. S.X.
0.02 9e-1 34 Vitis vinifera 1613650_at CF404435 hypothetical protein LOC100245905 - 3e-1 At3g24225 CLE19 (CLAVATA3/ESR-RELATED 19) C.G. S.X.
0.02 8e-2 38 Zea mays Zm.8100.2.A1_at CD447160 - - 3e-13 At1g61780 postsynaptic protein-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00347 Cytochrome P450

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
00903 Limonene and pinene degradation
00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
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