Gene omics information

Query gene ID At3g25610
Gene name haloacid dehalogenase-like hydrolase family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4457.2At3g25610822148haloacid dehalogenase-like hydrolase family proteinF:ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism;P:metabolic process, phospholipid transport, ATP biosynthetic process;C:plasma membrane;MBOFPAVS.X.H.G.
0.5065.3At1g62300842527WRKY6transcription factor WRKY6 (WRKY6)S.X.H.G.
0.5065.3At5g25930832662leucine-rich repeat family protein / protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane, membrane;MPOBFVAS.X.H.G.
0.4050.8At1g74360843777leucine-rich repeat transmembrane protein kinase, putativeF:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:mitochondrion;MPOBFVAS.X.H.G.
0.3338.1At1g28190839713unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFBS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
94.699.9GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
62.599.8GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transition
53.499.8GSM133029BC482-1GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
47.599.8E-MEXP-1443-raw-cel-1581869745
45.599.8E-MEXP-807-raw-cel-1173272948
41.999.8GSM184911Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
41.099.8E-MEXP-1443-raw-cel-1581869803
39.599.8GSM131325AtGen_6-3521_Saltstress-Roots-12.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
38.599.8GSM133030BC482-2GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
38.099.8GSM272992flu over-tAPX 14-2, biological rep2GSE10812Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.8201574At1g13210837881ACA.l (autoinhibited Ca2+/ATPase II)F:calmodulin binding, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism;P:metabolic process, phospholipid transport, ATP biosynthetic process;C:plasma membrane;MBOFPAC.G.S.X.
0.176e-56220At3g27870822407haloacid dehalogenase-like hydrolase family proteinF:ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism;P:metabolic process, ATP biosynthetic process, phospholipid transport;C:integral to membrane, membrane;MBOFPAVC.G.S.X.
0.312e-40169At1g68710843201haloacid dehalogenase-like hydrolase family proteinF:ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism;P:metabolic process, phospholipid transport, ATP biosynthetic process;C:mitochondrion, integral to membrane, membrane;MBOFPAVC.G.S.X.
0.263e-33145At1g26130839154haloacid dehalogenase-like hydrolase family proteinF:ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism;P:metabolic process, ATP biosynthetic process, phospholipid transport;C:plasma membrane, chloroplast envelope;MBOFPAVC.G.S.X.
0.084e-23111At1g72700843602haloacid dehalogenase-like hydrolase family proteinF:ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism;P:ATP biosynthetic process, phospholipid transport;C:integral to membrane, membrane;MBOFPAVC.G.S.X.
0.099e-1583At1g54280841869haloacid dehalogenase-like hydrolase family proteinF:ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism;P:phospholipid transport, ATP biosynthetic process;C:integral to membrane, membrane;MBOFPAVC.G.S.X.
0.081e-1069At1g17500838324ATPase, coupled to transmembrane movement of ions, phosphorylative mechanismF:ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism;P:metabolic process, ATP biosynthetic process, phospholipid transport;C:integral to membrane, membrane;MBOFPAVC.G.S.X.
0.052e-965At3g13900820603ATPase, coupled to transmembrane movement of ions, phosphorylative mechanismF:ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism;P:ATP biosynthetic process, phospholipid transport;C:integral to membrane, membrane;MBOFPAVC.G.S.X.
0.042e-656At1g59820842275ALA3 (Aminophospholipid ATPase3)Encodes a phospholipid translocase. Involved in secretory vesicle formation from trans-Golgi in peripheral columella cells at the root tip. Mutants have short primary roots and grow slower.C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e-1483Glycine maxGmaAffx.64805.1.S1_atBM890890--2e-13At1g54280haloacid dehalogenase-like hydrolase family proteinC.G.S.X.
0.036e-240Hordeum vulgareContig15864_atContig15864--5e-11At1g68710haloacid dehalogenase-like hydrolase family proteinC.G.S.X.
0.093e-1379Oryza sativaOsAffx.26674.1.S1_at---0C.G.S.X.
0.212e-44182Populus trichocarpaPtpAffx.210439.1.S1_atpmrna20500aminophospholipid ATPase-6e-65At1g68710haloacid dehalogenase-like hydrolase family proteinC.G.S.X.
0.116e-22107Triticum aestivumTa.19983.1.S1_atCA663916--2e-23At1g68710haloacid dehalogenase-like hydrolase family proteinC.G.S.X.
0.015e-136Vitis vinifera1611985_atCF404643hypothetical protein LOC100267021-2e-26At5g15880unknown proteinC.G.S.X.
0.013e+034Zea maysZm.4038.1.A1_atAI737071hypothetical protein LOC100274123-9e-5At1g75230HhH-GPD base excision DNA repair family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006754The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
LGO:0008152The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
LGO:0015914The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage