Gene omics information

Query gene ID At3g25250
Gene name AGC2-1 (OXIDATIVE SIGNAL-INDUCIBLE1)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4963.5At3g25250822119AGC2-1 (OXIDATIVE SIGNAL-INDUCIBLE1)Arabidopsis protein kinaseS.X.H.G.
0.8391.4At2g37430818319zinc finger (C2H2 type) family protein (ZAT11)F:transcription factor activity, zinc ion binding, nucleic acid binding;P:response to chitin, regulation of transcription;C:intracellular;MPOFS.X.H.G.
0.8290.9At1g14540838016anionic peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMS.X.H.G.
0.8190.4At1g69930843329ATGSTU11 (GLUTATHIONE S-TRANSFERASE TAU 11)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).S.X.H.G.
0.7687.4At1g30370839917lipase class 3 family proteinF:triacylglycerol lipase activity;P:lipid metabolic process;C:unknown;PBOFMVS.X.H.G.
0.7687.4At4g28460828963unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.7486.1At3g53600824528zinc finger (C2H2 type) family proteinF:transcription factor activity, zinc ion binding, nucleic acid binding;P:response to chitin, regulation of transcription;C:intracellular;PMFS.X.H.G.
0.7184.2At5g24110832476WRKY30member of WRKY Transcription Factor; Group IIIS.X.H.G.
0.7083.5At1g68765843208IDA (INFLORESCENCE DEFICIENT IN ABSCISSION)Encodes a small protein of 77 amino acids. Loss of function mutations are defective in the process of ethylene independent floral organ abscission. Although the mutants have a normal appearing abscission zone, the floral organs do not abscisce. The peptide appears to be secreted and may function as a ligand. Arabidopsis 35S:IDA lines constitutively overexpressing IDA exhibit earlier abscission of floral organs, showing that the abscission zones are responsive to IDA soon after the opening of the flowers. In addition, ectopic abscission was observed at the bases of the pedicel, branches of the inflorescence, and cauline leaves. The silique valves also dehisced prematurely.S.X.H.G.
0.7083.5At3g23220821900DNA binding / transcription factorencodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
221.6100.0GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
219.0100.0GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transition
212.6100.0GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transition
203.7100.0GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
190.4100.0E-MEXP-807-raw-cel-1173273088
171.8100.0E-MEXP-807-raw-cel-1173273223
157.399.9GSM131325AtGen_6-3521_Saltstress-Roots-12.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
155.799.9E-MEXP-807-raw-cel-1173273252
155.199.9GSM131321AtGen_6-3421_Saltstress-Roots-6.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
153.399.9E-MEXP-807-raw-cel-1173273116
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.491e-57224At4g13000826913protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MOFPBVAC.G.S.X.
0.044e-859At1g51170841540protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:unknown;MOFPBVAC.G.S.X.
0.041e-552At3g20830821631protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:chloroplast;MOFPBVAC.G.S.X.
0.052e-448At2g26700817211PID2 (PINOID2)Encodes PID2, a homolog of PID. Simultaneous disruption of PID(AT2G34650) and its 3 closest homologs (PID2/AT2G26700, WAG1/AT1G53700, and WAG2/AT3G14370) abolishes the formation of cotyledons.C.G.S.X.
0.021e-242At5g40030834000protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:chloroplast;MOPFBVAC.G.S.X.
0.024e-240At1g79250844265AGC1.7 (AGC KINASE 1.7)F:kinase activity;P:pollen tube growth, unidimensional cell growth;C:unknown;MOPFBVAC.G.S.X.
0.012e-138At4g39180830073SEC14encodes a protein that complements the function of a sec14(ts) mutant of S. cerevisiaeC.G.S.X.
0.026e-136At5g19650832085OFP8 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 8)F:unknown;P:biological_process unknown;C:unknown;PC.G.S.X.
0.026e-136At4g39840830143unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OMFBPVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.123e-1067Glycine maxGma.8262.1.A1_atBU550168--1e-10At3g25250AGC2-1 (OXIDATIVE SIGNAL-INDUCIBLE1)C.G.S.X.
0.031e+034Hordeum vulgareHB14L15r_atHB14L15r--1e+1At5g42290transcription activator-relatedC.G.S.X.
0.028e-240Oryza sativaOs.10783.2.S1_x_at---0C.G.S.X.
0.144e-1583Populus trichocarpaPtpAffx.202694.1.S1_x_atpmrna5381hypothetical protein-3e-15At3g25250AGC2-1 (OXIDATIVE SIGNAL-INDUCIBLE1)C.G.S.X.
0.023e+034Triticum aestivumTa.3753.1.S1_atBJ247323--2e+1At5g65220ribosomal protein L29 family proteinC.G.S.X.
0.023e+032Vitis vinifera1614524_atCB981815hypothetical protein LOC100261162-7e-9At5g51545LPA2 (low psii accumulation2)C.G.S.X.
0.021e+034Zea maysZmAffx.440.1.A1_atAI676978--2e-4At1g54410dehydrin family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006468The process of introducing a phosphate group on to a protein.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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