Gene omics information

Query gene ID At3g24530
Gene name AAA-type ATPase family protein / ankyrin repeat family protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3643.6At3g24530822048AAA-type ATPase family protein / ankyrin repeat family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:protein metabolic process;C:chloroplast;MOBFPVAS.X.H.G.
0.7385.5At5g47620834812heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putativeF:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPOFBAS.X.H.G.
0.6781.6At3g08730820020PK1 (PROTEIN-SERINE KINASE 1)Encodes a protein-serine kinase that phosphorylates ribosomal protein in vitro. Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Involved in translational up-regulation of ribosomal proteins. Phosphorylated by PDK1. Interacts with RAPTOR1, which in turn interacts with TOR. SPK6 activity is affected by osmotic stress, and plants overexpressing S6k1 are hypersensitive to osmotic stress. The gene is expressed in all tissues examined, with highest expression level detected in metabolically active tissues.S.X.H.G.
0.6075.7At1g10740837617unknown proteinF:unknown;P:glycerol biosynthetic process;C:endomembrane system;BOPFMS.X.H.G.
0.5974.7At3g57480824915zinc finger (C2H2 type, AN1-like) family proteinF:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:intracellular;MFOPS.X.H.G.
0.5873.8At5g16480831509tyrosine specific protein phosphatase family proteinF:phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity;P:dephosphorylation;C:cellular_component unknown;FOPBMS.X.H.G.
0.5773.8At3g12620820442protein phosphatase 2C family protein / PP2C family proteinF:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;PMOFBVS.X.H.G.
0.5570.6At5g58380835951SIP1 (SOS3-INTERACTING PROTEIN 1)Encodes a CBL-interacting protein kinase with similarity to SOS protein kinase.S.X.H.G.
0.5570.6At1g06700837180serine/threonine protein kinase, putativeF:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAS.X.H.G.
0.5368.6At5g61960836317AML1 (ARABIDOPSIS MEI2-LIKE PROTEIN 1)A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML1 is a member of two sister clades of mei2-like gene family, AML1 through AML5 and belongs to the clade named ALM14. AML1 is expressed during early embryo development, particularly along embryonic axis at torpedo stage, in shoot apex (weaker expression) and in the organogenic regions of floral apices.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.012e-138At2g23520816884catalytic/ pyridoxal phosphate bindingF:pyridoxal phosphate binding, catalytic activity;P:biological_process unknown;C:plasma membrane;PMFOBAC.G.S.X.
0.022e-138At1g63160842620replication factor C 40 kDa, putativeF:in 6 functions;P:DNA replication;C:DNA replication factor C complex;BOMFAPVC.G.S.X.
0.017e-136At5g15680831422bindingF:binding;P:biological_process unknown;C:plasma membrane, membrane;MFPOC.G.S.X.
0.017e-136At5g54610835550ANK (ankyrin)Induced in response to Salicylic acid. Belongs to the ankyrin repeat protein family.C.G.S.X.
0.017e-136At4g12560826869F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POC.G.S.X.
0.017e-136At3g16200820866unknown proteinF:molecular_function unknown;P:biological_process unknown;C:Golgi apparatus;OPBC.G.S.X.
0.013e+034At5g53750835456-F:molecular_function unknown;P:response to wounding;C:cellular_component unknown;PC.G.S.X.
0.013e+034At5g04860830365unknown proteinF:unknown;P:biological_process unknown;C:mitochondrion;PFOMBC.G.S.X.
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Orthologous genes

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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e-138Glycine maxGmaAffx.67147.1.S1_atBE331689--7e-1At1g66420transcription regulatorC.G.S.X.
0.161e-1067Hordeum vulgareContig12960_atContig12960--1e-10At3g24530AAA-type ATPase family protein / ankyrin repeat family proteinC.G.S.X.
0.191e-34149Oryza sativaOs02g0266300AK071896.1-Ankyrin repeat containing protein9e-35At3g24530AAA-type ATPase family protein / ankyrin repeat family proteinC.G.S.X.
0.352e-29131Populus trichocarpaPtpAffx.216976.1.S1_atpmrna32062hypothetical protein-2e-29At3g24530AAA-type ATPase family protein / ankyrin repeat family proteinC.G.S.X.
0.023e+034Triticum aestivumTaAffx.97567.1.S1_atBE429316--2e-1At5g04170calcium-binding EF hand family proteinC.G.S.X.
0.106e-1477Vitis vinifera1619681_atCD799678hypothetical protein LOC100254275-8e-14At3g24530AAA-type ATPase family protein / ankyrin repeat family proteinC.G.S.X.
0.212e-1479Zea maysZm.6692.2.S1_a_atBQ295538hypothetical protein LOC100193785-5e-14At3g24530AAA-type ATPase family protein / ankyrin repeat family proteinC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0019538The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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