Gene omics information

Query gene ID At3g24503
Gene name ALDH2C4
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g24503822042ALDH2C4Arabidopsis thaliana aldehyde dehydrogenase AtALDH1a mRNA. a sinapaldehyde dehydrogenase catalyzes both the oxidation of coniferylaldehyde and sinapaldehyde forming ferulic acid and sinapic acid, respectivelyS.X.H.G.
0.3948.4At3g27890822411NQR (NADPH:QUINONE OXIDOREDUCTASE)Encodes NAD(P)H:quinone reductase which is an FMN binding protein that catalyzes the reduction of quinone substrates to hydroquinones.The enzyme activity was confirmed by in vitro assay.S.X.H.G.
0.3643.6At5g45410834577unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBS.X.H.G.
0.3541.6At1g07240837235UGT71C5 (UDP-GLUCOSYL TRANSFERASE 71C5)F:quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBOVFS.X.H.G.
0.3439.8At2g30870817637GSTF10 (HALIANA GLUTATHIONE S-TRANSFERASE PHI 10)early dehydration-induced gene ERD13 homologous to tobacco and maize glutathione S-transferases. Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002)S.X.H.G.
0.3235.7At1g21380838737VHS domain-containing protein / GAT domain-containing proteinF:protein transporter activity;P:intracellular protein transport, intra-Golgi vesicle-mediated transport;C:Golgi stack, intracellular;MFPOBS.X.H.G.
0.3235.7At4g12010826809disease resistance protein (TIR-NBS-LRR class), putativeF:protein binding, transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAVS.X.H.G.
0.3032.1At1g59580842248ATMPK2 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE HOMOLOG 2)encodes a mitogen-activated kinase involved in innate immunityS.X.H.G.
0.2930.3At1g14000837960VIK (VH1-INTERACTING KINASE)Encodes a protein with similarity to members of the C1 subgroup of MAP kinase kinase kinases. Interacts physically with the receptor kinase BRL2/VH1 and appears to be involved in auxin and brassinosteriod signaling.S.X.H.G.
0.2930.3At4g23850828484long-chain-fatty-acid--CoA ligase / long-chain acyl-CoA synthetaseF:catalytic activity;P:fatty acid biosynthetic process;C:plasma membrane;BOMFPAVS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
34.399.7GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
18.499.5E-MEXP-828-raw-cel-1156922659
14.399.4GSM184484Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
13.699.4E-MEXP-828-raw-cel-1156922595
11.999.3E-MEXP-828-raw-cel-1156922342
11.799.3E-MEXP-828-raw-cel-1156922572
11.599.3GSM131164AtGen_C-14_2-Pi-12_REP2_ATH1GSE5616AtGenExpress: Response to Phytophthora infestans
11.499.3GSM184479Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
11.499.3GSM184481Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
11.299.2GSM133030BC482-2GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.031e-242At3g48000823955ALDH2B4 (ALDEHYDE DEHYDROGENASE 2B4)Encodes a putative (NAD+) aldehyde dehydrogenase.C.G.S.X.
0.015e-240At1g30820839964CTP synthase, putative / UTP--ammonia ligase, putativeF:CTP synthase activity, catalytic activity;P:pyrimidine ribonucleotide metabolic process, pyrimidine nucleotide biosynthetic process;C:unknown;OBMFAPC.G.S.X.
0.027e-136At5g19650832085OFP8 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 8)F:unknown;P:biological_process unknown;C:unknown;PC.G.S.X.
0.017e-136At1g25510839137aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PMFOC.G.S.X.
0.017e-136At1g79270844267ECT8 (evolutionarily conserved C-terminal region 8)F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFOC.G.S.X.
0.017e-136At1g21540838755AMP-binding protein, putativeF:catalytic activity;P:metabolic process;C:unknown;BOMFPAVC.G.S.X.
0.017e-136At1g20790838669F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OBMPVFAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.115e-654Glycine maxGmaAffx.18654.1.S1_atBI942201--9e-7At3g24503ALDH2C4C.G.S.X.
0.072e-963Hordeum vulgareContig6382_s_atContig6382--4e-9At3g24503ALDH2C4C.G.S.X.
0.062e-346Oryza sativaOs01g0591000AB037421.1-Cytosolic aldehyde dehydrogenase1e-3At3g24503ALDH2C4C.G.S.X.
0.202e-1481Populus trichocarpaPtpAffx.20905.1.S1_atCV130907hypothetical protein-2e-14At3g24503ALDH2C4C.G.S.X.
0.062e-757Triticum aestivumTa.25596.2.S1_atBQ788785--1e-7At3g24503ALDH2C4C.G.S.X.
0.022e-136Vitis vinifera1607454_atCF211439similar to KEA1 (K EFFLUX ANTIPORTER 1); potassium:hydrogen antiporter-7e-11At1g01790KEA1 (K EFFLUX ANTIPORTER 1)C.G.S.X.
0.061e-963Zea maysZm.10312.1.A1_atAF348415.2cytosolic aldehyde dehydrogenase RF2D-4e-9At3g24503ALDH2C4C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009699The chemical reactions and pathways resulting in the formation of aromatic derivatives of trans-cinnamic acid.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00064Link to KaPPA-View 4The cinnamate-monolignol pathway/sinapoyl ester biosynthesis



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00940Link to KEGG PATHWAYPhenylpropanoid biosynthesis
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