CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At3g24500

Gene name MBF1C (MULTIPROTEIN BRIDGING FACTOR 1C)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At3g24500 822041 MBF1C (MULTIPROTEIN BRIDGING FACTOR 1C) One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is specifically elevated in response to pathogen infection, salinity, drought, heat, hydrogen peroxide, and application of abscisic acid or salicylic acid. Constitutive expression enhances the tolerance of transgenic plants to various biotic and abiotic stresses. S.X. H.G.
0.97 97.6 At1g07400 837252 17.8 kDa class I heat shock protein (HSP17.8-CI) F:unknown;P:response to oxidative stress, response to heat;C:unknown;BPOFAM S.X. H.G.
0.97 97.6 At2g20560 816578 DNAJ heat shock family protein F:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;OBMFPAV S.X. H.G.
0.97 97.6 At5g51440 835218 23.5 kDa mitochondrial small heat shock protein (HSP23.5-M) F:molecular_function unknown;P:response to heat;C:unknown;BPOAFM S.X. H.G.
0.95 97.0 At1g74310 843771 ATHSP101 (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 101) Encodes ClpB1, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Involved in refolding of proteins which form aggregates under heat stress. Also known as AtHsp101. AtHsp101 is a cytosolic heat shock protein required for acclimation to high temperature. S.X. H.G.
0.93 96.4 At1g54050 841843 17.4 kDa class III heat shock protein (HSP17.4-CIII) F:molecular_function unknown;P:response to high light intensity, response to hydrogen peroxide, response to heat;C:unknown;BPOFAM S.X. H.G.
0.93 96.4 At1g30070 839886 SGS domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MOPF S.X. H.G.
0.92 96.0 At5g25450 832619 ubiquinol-cytochrome C reductase complex 14 kDa protein, putative F:ubiquinol-cytochrome-c reductase activity;P:mitochondrial electron transport, ubiquinol to cytochrome c;C:mitochondrion, mitochondrial respiratory chain complex III, membrane;MPFO S.X. H.G.
0.92 96.0 At2g29500 817499 17.6 kDa class I small heat shock protein (HSP17.6B-CI) F:molecular_function unknown;P:response to oxidative stress, response to cyclopentenone, response to high light intensity, response to hydrogen peroxide, response to heat;C:unknown;BPOFAM S.X. H.G.
0.92 96.0 At5g48570 834913 peptidyl-prolyl cis-trans isomerase, putative / FK506-binding protein, putative F:FK506 binding, peptidyl-prolyl cis-trans isomerase activity, calmodulin binding;P:protein folding;C:vacuole;BMOFPA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
225.4 100.0 E-MEXP-98-raw-cel-320188969
165.0 100.0 E-MEXP-1725-raw-cel-1669614623
150.9 99.9 GSM131453 AtGen_6-9321_Heatstress-Roots-3.0h_Rep1 GSE5628 AtGenExpress: Stress Treatments (Heat stress)
142.6 99.9 E-MEXP-1725-raw-cel-1669614562
140.9 99.9 GSM131454 AtGen_6-9322_Heatstress-Roots-3.0h_Rep2 GSE5628 AtGenExpress: Stress Treatments (Heat stress)
137.9 99.9 E-MEXP-98-raw-cel-320188914
126.7 99.9 E-MEXP-98-raw-cel-320188694
124.2 99.9 E-MEXP-1725-raw-cel-1669614582
118.7 99.9 E-MEXP-1725-raw-cel-1669614634
112.4 99.9 GSM131451 AtGen_6-9311_Heatstress-Shoots-3.0h_Rep1 GSE5628 AtGenExpress: Stress Treatments (Heat stress)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.03 2e-1 36 At5g48240 834877 unknown protein F:molecular_function unknown;P:biological_process unknown;C:nucleolus;MOFPB C.G. S.X.
0.03 2e-1 36 At5g13340 831175 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;MOBFPVA C.G. S.X.
0.02 2e-1 36 At3g20760 821624 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;FMPOB C.G. S.X.
0.02 2e-1 36 At1g57770 842152 amine oxidase family F:oxidoreductase activity;P:unknown;C:chloroplast;OBMPAF C.G. S.X.
0.01 2e-1 36 At1g21740 838778 unknown protein F:unknown;P:N-terminal protein myristoylation;C:unknown;MPOFBA C.G. S.X.
0.05 9e-1 34 At5g26790 832737 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.01 9e-1 34 At4g24190 828520 SHD (SHEPHERD) encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat. Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues. C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 5e+0 32 Glycine max HgAffx.16919.1.S1_at CD748832 - - 5e+0 At3g24500 MBF1C (MULTIPROTEIN BRIDGING FACTOR 1C) C.G. S.X.
0.03 4e-1 34 Hordeum vulgare Contig12510_at Contig12510 - - 4e-1 At5g26790 unknown protein C.G. S.X.
0.04 1e-1 38 Oryza sativa Os08g0229800 9636.m01312 - - 3e-3 At2g42390 protein kinase C substrate, heavy chain-related C.G. S.X.
0.04 1e+0 34 Populus trichocarpa PtpAffx.29124.1.A1_at DN487741 - - 2e-1 At1g28630 unknown protein C.G. S.X.
0.04 9e-1 34 Triticum aestivum TaAffx.86728.1.S1_at CA601835 - - 3e-1 At5g17480 APC1 (ARABIDOPSIS POLLEN CALCIUM-BINDING PROTEIN 1) C.G. S.X.
0.24 1e-27 121 Vitis vinifera 1621552_at BM437510 hypothetical protein LOC100249249 - 9e-27 At3g24500 MBF1C (MULTIPROTEIN BRIDGING FACTOR 1C) C.G. S.X.
0.04 6e+0 30 Zea mays ZmAffx.701.1.A1_at AI737983 hypothetical protein LOC100274433 - 2e-1 At1g03170 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0009408 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.
X GO:0009414 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.
X GO:0009737 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abscisic acid stimulus.
S GO:0045941 Any process that activates or increases the frequency, rate or extent of transcription.
S GO:0009873 A series of molecular signals mediated by ethylene (ethene).
C GO:0006350 The synthesis of either RNA on a template of DNA or DNA on a template of RNA.
C GO:0009723 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethylene (ethene) stimulus.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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