Gene omics information

Query gene ID At3g23550
Gene name MATE efflux family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6075.7At3g23550821934MATE efflux family proteinF:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFAMS.X.H.G.
0.6781.6At5g61160836237AACT1 (anthocyanin 5-aromatic acyltransferase 1)F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFS.X.H.G.
0.4457.2At3g49620824124DIN11 (DARK INDUCIBLE 11)encodes a protein similar to 2-oxoacid-dependent dioxygenase. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.S.X.H.G.
0.4050.8At1g06160837125ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.S.X.H.G.
0.2014.4At3g26200822221CYP71B22putative cytochrome P450S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
136.499.9GSM322550genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
129.499.9GSM131160AtGen_C-10_1-Pi-6_REP1_ATH1GSE5616AtGenExpress: Response to Phytophthora infestans
127.699.9GSM322548genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep1GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
125.599.9GSM322549genotype: Wild-type Arabidopsis, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
120.599.9GSM131161AtGen_C-11_2-Pi-6_REP2_ATH1GSE5616AtGenExpress: Response to Phytophthora infestans
113.199.9GSM131162AtGen_C-12_3-Pi-6_REP3_ATH1GSE5616AtGenExpress: Response to Phytophthora infestans
111.699.9GSM322554genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep1GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
111.499.9GSM322555genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
100.199.9GSM133029BC482-1GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
97.999.9GSM322556genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep3GSE12856Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.8401445At3g23560821935ALF5 (ABERRANT LATERAL ROOT FORMATION 5)Member of the multidrug and toxic compound extrusion (MATE) family, protects roots from inhibitory compounds.C.G.S.X.
0.013e-344At4g19900827735glycosyl transferase-relatedF:transferase activity, transferring glycosyl groups;P:biological_process unknown;C:mitochondrion, Golgi stack;POMFBAC.G.S.X.
0.023e-344At2g34360817999antiporter/ drug transporter/ transporterF:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFAMC.G.S.X.
0.012e-138At5g15870831444glycosyl hydrolase family 81 proteinF:hydrolase activity, acting on glycosyl bonds, endo-1,3(4)-beta-glucanase activity;P:response to cyclopentenone;C:unknown;FPOMVBC.G.S.X.
0.017e-136At4g14300827071heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putativeF:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MBOPFVAC.G.S.X.
0.017e-136At4g24710828573ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide bindingF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:unknown;BOMFPAVC.G.S.X.
0.017e-136At2g30310817581GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMC.G.S.X.
0.017e-136At1g72150843546PATL1 (PATELLIN 1)novel cell-plate-associated protein that is related in sequence to proteins involved in membrane trafficking in other eukaryotesC.G.S.X.
0.013e+034At5g12220831096las1-like family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.024e+034Glycine maxGmaAffx.10115.1.S1_atBQ081312--8e-1At1g32600F-box family protein-relatedC.G.S.X.
0.029e-238Hordeum vulgareContig14215_atContig14215--4e+0At3g1874060S ribosomal protein L30 (RPL30C)C.G.S.X.
0.031e+036Oryza sativaOs07g01082009635.m00077-Multi antimicrobial extrusion protein MatE familyprotein3e-3At3g23560ALF5 (ABERRANT LATERAL ROOT FORMATION 5)C.G.S.X.
0.111e-1585Populus trichocarpaPtpAffx.224757.1.S1_atpmrna43587hypothetical protein-8e-16At3g23550MATE efflux family proteinC.G.S.X.
0.021e-242Triticum aestivumTaAffx.129249.1.S1_x_atCK213796--4e-2At3g20750zinc finger (GATA type) family proteinC.G.S.X.
0.028e-134Vitis vinifera1610295_atBQ797947hypothetical protein LOC100259329-8e-5At2g25090CIPK16 (CBL-INTERACTING PROTEIN KINASE 16)C.G.S.X.
0.025e+032Zea maysZmAffx.783.1.S1_atAI745854--8e-7At1g51730RWD domain-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006855The directed movement of drugs across a membrane into, out of, within or between cells.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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