Gene omics information

Query gene ID At3g23400
Gene name plastid-lipid associated protein PAP / fibrillin family protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At3g23400821921plastid-lipid associated protein PAP / fibrillin family proteinF:structural molecule activity, transporter activity, binding;P:transport;C:in 8 components;PBOS.X.H.G.
0.7486.1At5g03880831679electron carrierF:electron carrier activity;P:cell redox homeostasis;C:chloroplast thylakoid membrane, chloroplast;BOPAFMS.X.H.G.
0.7184.2At1g767308440075-formyltetrahydrofolate cyclo-ligase family proteinF:catalytic activity, ATP binding, 5-formyltetrahydrofolate cyclo-ligase activity;P:folic acid and derivative biosynthetic process, metabolic process;C:chloroplast;MBAOPFS.X.H.G.
0.6882.2At5g38660833856APE1 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT)mutant has Altered acclimation responses;S.X.H.G.
0.6781.6At3g27925822416DEGP1 (DegP protease 1)Encodes a DegP protease; nuclear gene encoding chloroplast-targeted protease that can degrade two lumenal proteins, plastocyanin and OE33, suggesting a role as a general-purpose protease in the thylakoid lumen. Involved in the degradation of D1 protein of PS II, hence participating in the repair of PS II damages caused by photoinhibition.S.X.H.G.
0.6579.6At5g14970831349unknown proteinF:unknown;P:unknown;C:unknown;BOPS.X.H.G.
0.6378.1At2g01110814640APG2 (ALBINO AND PALE GREEN 2)mutant is Albino and pale green; Chloroplast Protein Translocation (tatC). Core subunit of the chloroplast Tat translocase. Integral chloroplast thylakoid membrane protein.S.X.H.G.
0.6075.7At1g54520841894unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;BPOMS.X.H.G.
0.5974.7At1g68660843196-F:molecular_function unknown;P:protein catabolic process;C:unknown;BOPS.X.H.G.
0.5773.8At2g27290817272unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast thylakoid membrane, chloroplast;MPOS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.698.9GSM170911abh1 +ABA repl1GSE7112Abscisic acid effect on wild type and the abh1 mutant
7.198.8GSM133783Brueggemann_A-1-Brueg-uvb_SLDGSE5731UV-B Responses in Light Grown Plants: Similarities to Biotic Stress
7.098.7GSM157312Hammond_3-2_Potassium-starved-shoot_Rep1_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plants
6.998.7GSM131121AtGen_B-7_1-7-1_REP_1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
6.998.7GSM264763Tween 0.1% 4hGSE10464Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.023e-240At2g02790814808IQD29 (IQ-domain 29)F:calmodulin binding;P:biological_process unknown;C:plasma membrane;MOFPBVAC.G.S.X.
0.034e-136At3g06840819868unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.034e-136At3g22530821824unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PC.G.S.X.
0.014e-136At3g26280822231CYP71B4cytochrome P450 monooxygenaseC.G.S.X.
0.024e-136At1g21600838761PTAC6 (PLASTID TRANSCRIPTIONALLY ACTIVE6)Present in transcriptionally active plastid chromosomes. Involved in plastid gene expression.C.G.S.X.
0.012e+034At5g65450836670UBP17 (UBIQUITIN-SPECIFIC PROTEASE 17)Encodes a ubiquitin-specific protease.C.G.S.X.
0.012e+034At5g56010835699HSP81-3a member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl.C.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.036e-136Glycine maxGma.13304.1.A1_atCD392606--4e-6At1g68870unknown proteinC.G.S.X.
0.032e-136Hordeum vulgareContig25150_atContig25150--3e-1At3g23400plastid-lipid associated protein PAP / fibrillin family proteinC.G.S.X.
0.045e-240Oryza sativaOs11g0595200AK106159.1-PAP fibrillin family protein4e-2At3g23400plastid-lipid associated protein PAP / fibrillin family proteinC.G.S.X.
0.166e-446Populus trichocarpaPtp.5883.1.S1_atCV231755hypothetical protein-6e-4At3g23400plastid-lipid associated protein PAP / fibrillin family proteinC.G.S.X.
0.037e+032Triticum aestivumTaAffx.51965.1.S1_atCA715679--2e-1At4g33960unknown proteinC.G.S.X.
0.144e-1477Vitis vinifera1607276_atCF202469.1--1e-13At3g23400plastid-lipid associated protein PAP / fibrillin family proteinC.G.S.X.
0.033e+032Zea maysZm.4795.2.A1_x_atAI740164--2e-1At4g28703-C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006810The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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