Gene omics information

Query gene ID At3g23050
Gene name IAA7 (INDOLE-3-ACETIC ACID 7)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4050.8At3g23050821879IAA7 (INDOLE-3-ACETIC ACID 7)Transcription regulator acting as repressor of auxin-inducible gene expression. Plays role in the control of gravitropic growth and development in light-grown seedlings. Auxin induces the degradation of the protein in a dosage-dependent manner in a process mediated by AtRac1. Auxin induced the relocalization of the protein within the nucleus from a diffused nucleoplasmic pattern to a discrete particulated pattern named nuclear protein bodies or NPB in a process also mediated by Rac1. Colocalizes with SCF, CSN and 26S proteasome components.S.X.H.G.
0.2930.3At1g01120839395KCS1 (3-KETOACYL-COA SYNTHASE 1)Encodes a condensing enzyme KCS1 (3-ketoacyl-CoA synthase 1) which is involved in the critical fatty acid elongation process in wax biosynthesis.S.X.H.G.
0.2930.3At2g06850815247EXGT-A1 (ENDOXYLOGLUCAN TRANSFERASE)endoxyloglucan transferase (EXGT-A1) geneS.X.H.G.
0.2522.6At4g386908300251-phosphatidylinositol phosphodiesterase-relatedF:phospholipase C activity, phosphoric diester hydrolase activity;P:intracellular signaling cascade, N-terminal protein myristoylation, lipid metabolic process;C:cellular_component unknown;BFMPOS.X.H.G.
0.092.8At1g68530843182KCS6 (3-KETOACYL-COA SYNTHASE 6)Encodes KCS6, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
34.699.7GSM292081pif1-2, dark sample, biological rep3GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
30.599.7GSM266668Arabidopsis, root cells, columella root cap, -Fe, replicate 3GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
29.299.7GSM292080pif1-2, dark sample, biological rep2GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
27.699.7GSM292077Wt, dark sample, biological rep2GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
25.699.7GSM292079pif1-2, dark sample, biological rep1GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
25.499.6GSM292078Wt, dark sample, biological rep3GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
24.899.6E-MEXP-715-raw-cel-1121835979
23.999.6GSM131607ATGE_42_CGSE5632AtGenExpress: Developmental series (flowers and pollen)
23.799.6GSM184893Arabidopsis, root cells, columella root cap, standard conditions, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
22.999.6GSM131606ATGE_42_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.712e-101369At4g14550827102IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)IAA14 is a member of the Aux/IAA protein family. Involved in lateral root development. Gain of function mutation decreases auxin-inducible gene expression. Protein is localized to the nucleus. Expressed in stele and root tip epidermis. Functions as a negative regulator of ARF7/19.C.G.S.X.
0.285e-1995At3g04730819633IAA16early auxin-induced (IAA16)C.G.S.X.
0.364e-1065At1g04250839568AXR3 (AUXIN RESISTANT 3)Transcription regulator acting as repressor of auxin-inducible gene expression. Auxin-inducible AUX/IAA gene. Short-lived nuclear protein with four conserved domains. Domain III has homology to beta alpha alpha dimerization and DNA binding domains. Involved in auxin signaling. Auxin induces the degradation of the protein in a dosage-dependent manner in a process mediated by AtRac1. Auxin induced the relocalization of the protein within the nucleus from a diffused nucleoplasmic pattern to a discrete particulated pattern named nuclear protein bodies or NPB in a process also mediated by Rac1. Colocalizes with SCF, CSN and 26S proteasome components.C.G.S.X.
0.072e-859At1g04240839570SHY2 (SHORT HYPOCOTYL 2)SHY2/IAA3 regulates multiple auxin responses in roots. It is induced rapidly by IAA, and has been shown to be phosphorylated by oat phytochrome A in vitro.C.G.S.X.
0.111e-757At5g43700834390ATAUX2-11 (AUXIN INDUCIBLE 2-11)Auxin inducible protein similar to transcription factors.C.G.S.X.
0.084e-756At3g23030821877IAA2 (INDOLE-3-ACETIC ACID INDUCIBLE 2)auxin inducible gene expressed in the nucleusC.G.S.X.
0.112e-654At5g65670836693IAA9 (INDOLE-3-ACETIC ACID INDUCIBLE 9)auxin (indole-3-acetic acid) induced geneC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.457e-59228Glycine maxGmaAffx.93321.1.S1_x_atCF809046--2e-69At4g14550IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)C.G.S.X.
0.103e-652Hordeum vulgareContig322_atContig322--1e-5At3g23050IAA7 (INDOLE-3-ACETIC ACID 7)C.G.S.X.
0.172e-1997Oryza sativaOs03g0742900AK059838.1-AUX/IAA protein family protein2e-19At3g23050IAA7 (INDOLE-3-ACETIC ACID 7)C.G.S.X.
0.327e-25115Populus trichocarpaPtpAffx.201688.1.S1_atpmrna3365hypothetical protein-1e-23At3g04730IAA16C.G.S.X.
0.142e-1273Triticum aestivumTa.18018.1.S1_atCA627383--1e-9At1g52830IAA6 (INDOLE-3-ACETIC ACID 6)C.G.S.X.
0.321e-35149Vitis vinifera1619741_atCB339880hypothetical protein LOC100259693-4e-50At4g14550IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)C.G.S.X.
0.112e-1685Zea maysZm.3607.1.A1_atAW017627IAA30 - auxin-responsive Aux/IAA family member-1e-14At4g14550IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009414A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.
XGO:0009611A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism.
XGO:0009753A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a jasmonic acid stimulus.
XGO:0009630The orientation of plant parts under the stimulation of gravity.
SGO:0009733A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an auxin stimulus.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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