CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At3g22790

Gene name kinase interacting family protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.40 50.8 At3g22790 821850 kinase interacting family protein F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MOBFPAV S.X. H.G.
0.90 95.1 At3g02640 821289 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;PO S.X. H.G.
0.89 94.6 At4g15830 827264 binding F:binding;P:biological_process unknown;C:cellular_component unknown;MPOF S.X. H.G.
0.84 91.9 At4g05190 825867 ATK5 (ARABIDOPSIS THALIANA KINESIN 5) ATK5 encodes a kinesin protein involved in microtubule spindle morphogenesis. It acts as a minus-end directed motor as well as a plus-end tracking protein (+TIP). Localizes to mitotic spindle midzones and regions rich in growing plus-ends within phragmoplasts. S.X. H.G.
0.80 89.8 At1g76310 843964 CYCB2 core cell cycle genes S.X. H.G.
0.78 88.6 At4g33260 829462 CDC20.2 putative cdc20 protein (CDC20.2) S.X. H.G.
0.75 86.9 At1g18370 838418 HIK (HINKEL) Mutant has cytokinesis defects; seedling lethal S.X. H.G.
0.73 85.5 At3g25980 822195 mitotic spindle checkpoint protein, putative (MAD2) F:DNA binding;P:mitosis, mitotic cell cycle spindle assembly checkpoint;C:endomembrane system;MFOP S.X. H.G.
0.71 84.2 At1g02730 839467 ATCSLD5 Encodes a gene similar to cellulose synthase. Knock-out mutant has reduced growth, reduced xylan level and reduced xylan synthase activity in stems. S.X. H.G.
0.71 84.2 At3g53190 824485 pectate lyase family protein F:lyase activity, pectate lyase activity;P:biological_process unknown;C:anchored to membrane;BPFO S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
48.1 99.8 E-MEXP-682-raw-cel-922397560
36.3 99.7 GSM284387 Arabidopsis GSUS4b GSE11262 Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
28.6 99.7 E-MEXP-682-raw-cel-922397577
27.8 99.7 GSM284386 Arabidopsis GSUS3 GSE11262 Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
26.2 99.7 GSM131664 ATGE_46_A GSE5633 AtGenExpress: Developmental series (shoots and stems)
25.2 99.6 E-MEXP-682-raw-cel-922397662
23.5 99.6 E-MEXP-728-raw-cel-1062074577
22.0 99.6 E-MEXP-682-raw-cel-922397713
21.8 99.6 E-MEXP-728-raw-cel-1062074653
21.6 99.6 GSM242955 Steroid day 1 (day1D1) GSE9605 Target genes of AGAMOUS during early flower development in Arabidopsis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.59 0 747 At4g14760 827131 - F:unknown;P:unknown;C:nucleus;MOBFPAV C.G. S.X.
0.05 8e-22 107 At4g02710 828199 kinase interacting family protein F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MOBFPAV C.G. S.X.
0.04 5e-14 81 At1g03080 838350 - F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MOBFPAV C.G. S.X.
0.01 2e-4 50 At5g10500 830914 kinase interacting family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAV C.G. S.X.
0.02 7e-4 48 At5g58320 835944 kinase interacting protein-related F:unknown;P:biological_process unknown;C:unknown;MOBFPAV C.G. S.X.
0.01 2e-1 40 At5g13400 831181 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:membrane;PBMOF C.G. S.X.
0.01 2e-1 40 At2g41510 818749 CKX1 (CYTOKININ OXIDASE/DEHYDROGENASE 1) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 9e-1 38 Glycine max GmaAffx.27824.1.S1_x_at BI893732 - - 6e-1 At1g56420 unknown protein C.G. S.X.
0.01 2e-2 42 Hordeum vulgare Contig12483_at Contig12483 - - 2e-3 At3g57390 AGL18 C.G. S.X.
0.04 5e-28 129 Oryza sativa OsAffx.24932.2.S1_x_at - - - 0 C.G. S.X.
0.05 4e-43 178 Populus trichocarpa PtpAffx.28135.1.S1_at CK096581 - - 9e-12 At4g02710 kinase interacting family protein C.G. S.X.
0.01 2e-1 40 Triticum aestivum Ta.3854.1.S1_at BJ251320 M7 protein - 9e-3 At2g22540 SVP (SHORT VEGETATIVE PHASE) C.G. S.X.
0.02 1e-2 42 Vitis vinifera 1613579_at CF209229 hypothetical protein LOC100254535 - 1e-2 At3g22790 kinase interacting family protein C.G. S.X.
0.01 3e-1 38 Zea mays Zm.14916.2.S1_at CF633656 - - 1e-6 At2g33210 HSP60-2 (HEAT SHOCK PROTEIN 60-2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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