Gene omics information

Query gene ID At3g22160
Gene name VQ motif-containing protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6176.7At3g22160821780VQ motif-containing proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;POMFBVS.X.H.G.
0.6176.7At3g09830820141protein kinase, putativeF:protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAS.X.H.G.
0.6176.7At1g01560839523ATMPK11member of MAP KinaseS.X.H.G.
0.6075.7At2g05940815147protein kinase, putativeF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAS.X.H.G.
0.5974.7At4g34390829589XLG2 (extra-large GTP-binding protein 2)F:guanyl nucleotide binding, signal transducer activity;P:in 7 processes;C:nucleus;MFPOBS.X.H.G.
0.5673.0At5g35735833550auxin-responsive family proteinF:unknown;P:unknown;C:plasma membrane, membrane;PMFOBS.X.H.G.
0.5570.6At4g34150829563C2 domain-containing proteinF:unknown;P:response to cold;C:unknown;MPFOBVAS.X.H.G.
0.5570.6At2g15390816031FUT4Predicted fucosyltransferase, based on similarity to FUT1, but not functionally redundant with FUT1.S.X.H.G.
0.5570.6At1g07000837210ATEXO70B2 (exocyst subunit EXO70 family protein B2)A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.S.X.H.G.
0.5469.5At3g11840820357PUB24 (PLANT U-BOX 24)Encodes a U-box-domain-containing E3 ubiquitin ligase that acts as a negative regulator of PAMP-triggered immunity.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
88.499.9E-MEXP-807-raw-cel-1173273170
74.099.9GSM128661Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
60.499.8E-MEXP-807-raw-cel-1173273144
53.399.8GSM128675Underwood_1-28_DC3000-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
51.099.8GSM142846MG001_ATH1_A27-Torres-9N1GSE6176Impact of Type III effectors on plant defense responses
49.899.8GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transition
47.899.8GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
46.099.8GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
42.499.8E-MEXP-807-raw-cel-1173273116
42.399.8E-MEXP-807-raw-cel-1173273060
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.321e-1583At4g15120827178VQ motif-containing proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;POMFAC.G.S.X.
0.045e-342At5g65170836641VQ motif-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPFBC.G.S.X.
0.052e-240At1g35830840485VQ motif-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFVBC.G.S.X.
0.037e-238At3g47720823926SRO4 (SIMILAR TO RCD ONE 4)Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation.C.G.S.X.
0.033e-136At4g39720830127VQ motif-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPMFC.G.S.X.
0.013e-136At4g29010829022AIM1 (ABNORMAL INFLORESCENCE MERISTEM)Functions in beta-oxidation of fatty acids, similar to CuMFP with L-3-hydroxyacyl-CoA hydrolyase , L-3-hydroxyacyl-dehydrogenase, D-3-hydroxyacyl-CoA epimerase, and 3, 2-enoyl-CoA isomerase activitiesC.G.S.X.
0.013e-136At3g25840822178protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:nucleus;MOFPBVAC.G.S.X.
0.011e+034At5g23575832423transmembrane protein, putativeF:unknown;P:biological_process unknown;C:endoplasmic reticulum, membrane;MOFPC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e+034Glycine maxGmaAffx.64584.2.S1_atAW099253--6e-4At1g13260RAV1C.G.S.X.
0.046e-754Hordeum vulgareContig13615_atContig13615--1e-5At4g15120VQ motif-containing proteinC.G.S.X.
0.051e-861Oryza sativaOs02g01732009630.m00720-VQ domain containing protein1e-5At4g15120VQ motif-containing proteinC.G.S.X.
0.044e-136Populus trichocarpaPtpAffx.161.1.A1_atDN491136hypothetical protein-2e-14At5g65110ACX2 (ACYL-COA OXIDASE 2)C.G.S.X.
0.035e+032Triticum aestivumTaAffx.105375.1.S1_atCA735373--4e+0At1g23149CPuORF29 (Conserved peptide upstream open reading frame 29)C.G.S.X.
0.031e+032Vitis vinifera1621937_atCK138151.1hypothetical protein LOC100245655-2e-1At4g02810unknown proteinC.G.S.X.
0.052e-961Zea maysZm.16973.1.S1_atCD219246VQ motif family protein-1e-8At3g22160VQ motif-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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