CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At3g22060

Gene name receptor protein kinase-related

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.50 65.3 At3g22060 821768 receptor protein kinase-related contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069, however this protein does not have the protein kinase domain S.X. H.G.
0.57 73.8 At5g48540 834910 33 kDa secretory protein-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.44 57.2 At5g01540 831722 LECRKA4.1 (LECTIN RECEPTOR KINASE A4.1) Encodes LecRKA4.1, a member of the lectin receptor kinase subfamily A4 (LecRKA4.1 At5g01540; LecRKA4.2 At5g01550; LecRKA4.3 At5g01560). Together with other members of the subfamily, functions redundantly in the negative regulation of ABA response in seed germination. S.X. H.G.
0.27 26.2 At2g27660 817312 DC1 domain-containing protein F:zinc ion binding;P:unknown;C:chloroplast;BPMOFVA S.X. H.G.
0.23 19.3 At4g01250 827896 WRKY22 member of WRKY Transcription Factor; Group II-e S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
128.2 99.9 E-MEXP-807-raw-cel-1173272948
120.2 99.9 E-MEXP-807-raw-cel-1173273252
87.0 99.9 GSM142853 MG001_ATH1_A6-Torres-2N6 GSE6176 Impact of Type III effectors on plant defense responses
83.0 99.9 E-MEXP-807-raw-cel-1173273170
78.1 99.9 E-MEXP-807-raw-cel-1173273223
73.2 99.9 E-MEXP-1094-raw-cel-1379507313
72.7 99.9 E-MEXP-807-raw-cel-1173273196
72.5 99.9 GSM142852 MG001_ATH1_A5-Torres-2N3 GSE6176 Impact of Type III effectors on plant defense responses
62.1 99.8 E-MEXP-1094-raw-cel-1379507273
58.6 99.8 E-MEXP-807-raw-cel-1173273032
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.15 8e-27 121 At3g58310 825000 receptor-like protein kinase-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P C.G. S.X.
0.09 3e-17 89 At3g22010 821761 receptor-like protein kinase-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P C.G. S.X.
0.11 3e-14 79 At3g21990 821759 receptor-like protein kinase-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P C.G. S.X.
0.05 7e-12 71 At3g21910 821746 receptor-like protein kinase-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P C.G. S.X.
0.07 4e-10 65 At3g29050 822549 receptor-like protein kinase-related F:molecular_function unknown;P:biological_process unknown;C:unknown;P C.G. S.X.
0.10 2e-9 63 At4g20680 827815 receptor-like protein kinase-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P C.G. S.X.
0.10 2e-9 63 At4g20670 827814 lipase F:lipase activity;P:biological_process unknown;C:extracellular region;P C.G. S.X.
0.06 2e-9 63 At3g21980 821757 receptor-like protein kinase-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P C.G. S.X.
0.10 2e-9 63 At3g22000 821760 receptor-like protein kinase-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e-2 40 Glycine max GmaAffx.73960.1.S1_at BM892086 - - 3e-3 At3g04490 unknown protein C.G. S.X.
0.02 1e+1 30 Hordeum vulgare Contig14396_at Contig14396 - - 2e+0 At1g24000 Bet v I allergen family protein C.G. S.X.
0.01 1e+1 32 Oryza sativa Os02g0643200 AK106784.1 - YABBY protein family protein 2e-13 At4g00180 YAB3 (YABBY3) C.G. S.X.
0.05 5e-4 46 Populus trichocarpa PtpAffx.222219.1.S1_at pmrna39489 - - 5e-3 At3g22020 - C.G. S.X.
0.04 4e-1 36 Triticum aestivum Ta.21990.1.S1_at CA713406 - - 2e+0 At4g18500 unknown protein C.G. S.X.
0.03 2e+0 32 Vitis vinifera 1616525_s_at CF200762.1 hypothetical protein LOC100243581 - 1e-15 At5g46430 60S ribosomal protein L32 (RPL32B) C.G. S.X.
0.04 1e+1 30 Zea mays ZmAffx.418.1.A1_at AI676850 - - 1e-2 Atmg00760 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0009737 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abscisic acid stimulus.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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